RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 BNC1Q01954 994 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 ZNF177Q13360 481 aaPredicted RBP16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 ELAVL3Q14576 367 aaKnown RBP16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 KIF19Q2TAC6 998 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 KIAA0895LQ68EN5 471 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 DPY19L2P1Q6NXN4 242 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 SND1Q7KZF4 910 aaKnown RBP eCLIP16.68■□□□□ 0.261e-15■■■■□ 20.1
CLSTN3-204ENST00000535313 ADAT2Q7Z6V5 191 aaKnown RBP16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 TM9SF3Q9HD45 589 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 TM7SF3Q9NS93 570 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 VANGL2Q9ULK5 521 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 FZD4Q9ULV1 537 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 STAP1Q9ULZ2 295 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 FNDC3AQ9Y2H6 1198 aaKnown RBP16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 NEUROG3Q9Y4Z2 214 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 FHOD1Q9Y613 1164 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 HS3ST4Q9Y661 456 aa16.68■□□□□ 0.26
CLSTN3-204ENST00000535313 IGF2RP11717 2491 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 PAGE1O75459 146 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 ADH1BP00325 375 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 EEF1GP26641 437 aaKnown RBP16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 NUMBP49757 651 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 CENPCQ03188 943 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 KCNMA1Q12791 1236 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 SUZ12Q15022 739 aaKnown RBP16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 TCP11X2Q5H9J9 407 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 CXorf57Q6NSI4 855 aaKnown RBP16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 NCEH1Q6PIU2 408 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 ERICH1Q86X53 443 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 STK40Q8N2I9 435 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 MSANTD4Q8NCY6 345 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 IGSF8Q969P0 613 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 C18orf8Q96DM3 657 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 FAM129BQ96TA1 746 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 SIK2Q9H0K1 926 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 NEUROG2Q9H2A3 272 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 WDCPQ9H6R7 721 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 SAMSN1Q9NSI8 373 aaKnown RBP16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 TMEM51Q9NW97 253 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 SERGEFQ9UGK8 458 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 SLC25A13Q9UJS0 675 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 ANKRD6Q9Y2G4 727 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 PAXBP1Q9Y5B6 917 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 PCDHGB2Q9Y5G2 931 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 SLCO1B1Q9Y6L6 691 aa16.67■□□□□ 0.26
CLSTN3-204ENST00000535313 CLDN11O75508 207 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 F9P00740 461 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 IL1BP01584 269 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 IGHV4-34P06331 123 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 TPM2P07951 284 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 UCHL3P15374 230 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 C5AR1P21730 350 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 CDH5P33151 784 aaPredicted RBP16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 SULT1E1P49888 294 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 GALCP54803 685 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 BRMS1LQ5PSV4 323 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 FAM102AQ5T9C2 384 aaPredicted RBP16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 TAF3Q5VWG9 929 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 OR2T34Q8NGX1 318 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 PTPRN2Q92932 1015 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 NPY6RQ99463 290 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 STK33Q9BYT3 514 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 TKTL2Q9H0I9 626 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 PIGVQ9NUD9 493 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 ADAMTS1Q9UHI8 967 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 VPS28Q9UK41 221 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 PCOLCE2Q9UKZ9 415 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 SNX11Q9Y5W9 270 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 CABIN1Q9Y6J0 2220 aa16.66■□□□□ 0.26
CLSTN3-204ENST00000535313 A0A1W2PPC4 97 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 TMEM8BA6NDV4 472 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 FLRT2O43155 660 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 LSM8O95777 96 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 FTH1P19P0C7X4 201 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 GOT1P17174 413 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 SCNN1AP37088 669 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 GGCXP38435 758 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 GABRB2P47870 512 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 CXCR3P49682 368 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 VASPP50552 380 aaPredicted RBP16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 CDH4P55283 916 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 C21orf59P57076 290 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 RACK1P63244 317 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 DEUP1Q05D60 604 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 ACCSLQ4AC99 568 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 DSG4Q86SJ6 1040 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 C14orf80Q86SX3 495 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 CHCHD4Q8N4Q1 142 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 OR14C36Q8NHC7 312 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 ENOX1Q8TC92 643 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 GATA6Q92908 595 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 SKA1Q96BD8 255 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 SPAG5Q96R06 1193 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 FEM1AQ9BSK4 669 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 NAA15Q9BXJ9 866 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 ACE2Q9BYF1 805 aaPredicted RBP16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 MUC3BQ9H195 1237 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 ARHGEF38Q9NXL2 777 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 TAB2Q9NYJ8 693 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms