RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 APOC4-APOC2K7ER74 178 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 PDE2AO00408 941 aaPredicted RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 BTN3A1O00481 513 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 MEIS2O14770 477 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 TM9SF1O15321 606 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 GJB6O95452 261 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 APOC2P02655 101 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 GJB1P08034 283 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 HTR1BP28222 390 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 GABRR2P28476 465 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 PIK3CGP48736 1102 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 IRAK1P51617 712 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 TBL3Q12788 808 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CRY1Q16526 586 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 DDR2Q16832 855 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 ANKRD23Q86SG2 305 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 RIN3Q8TB24 985 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 GPR152Q8TDT2 470 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 MYLPFQ96A32 169 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 PTPRHQ9HD43 1115 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 STK39Q9UEW8 545 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 DDX3XO00571 662 aaKnown RBP eCLIP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CCDC159P0C7I6 412 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 GTF2BQ00403 316 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 AGKQ53H12 422 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 N4BP2L1Q5TBK1 243 aaPredicted RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 ZNF544Q6NX49 715 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 PIGZQ86VD9 579 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CLYBLQ8N0X4 340 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 HNRNPLLQ8WVV9 542 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 ACO2Q99798 780 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CPNE1Q99829 537 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 EXO5Q9H790 373 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 C2CD2Q9Y426 696 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 A0A096LPK6 155 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 SEC22BO75396 215 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 FARP2O94887 1054 aaPredicted RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CLTBP09497 229 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 PYGMP11217 842 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 ATP6V1C1P21283 382 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 BGNP21810 368 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 TARSP26639 723 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 GPR15P49685 360 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 C21orf59P57076 290 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 MRPL28Q13084 256 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CCDC153Q494R4 210 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 NYAP1Q6ZVC0 841 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 GET4Q7L5D6 327 aaPredicted RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 DET1Q7L5Y6 550 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 ZNF655Q8N720 491 aaPredicted RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 NAT16Q8N8M0 369 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 HJURPQ8NCD3 748 aaPredicted RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 MRPL48Q96GC5 212 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 DNAJC1Q96KC8 554 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CCT7Q99832 543 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 DUSP9Q99956 384 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 MLPHQ9BV36 600 aaPredicted RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 MID1IP1Q9NPA3 183 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 DDX28Q9NUL7 540 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 FAM105AQ9NUU6 356 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 ARL15Q9NXU5 204 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 ZMYM5Q9UJ78 669 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 OPLAHO14841 1288 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 USP12O75317 370 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 SELPP16109 830 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 DGKAP23743 735 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 RBL1P28749 1068 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 PPP3CAQ08209 521 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 ANGPT1Q15389 498 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 PAGE2BQ5JRK9 111 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 TTC33Q6PID6 262 aaPredicted RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 SLAIN1Q8ND83 568 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 TMEM161BQ8NDZ6 487 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 VPS33AQ96AX1 596 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CLIP3Q96DZ5 547 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 RNPEPQ9H4A4 650 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CRYL1Q9Y2S2 319 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 SALL3Q9BXA9 1300 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 TRIM13O60858 407 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 GUCY1B2O75343 617 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 IFNA16P05015 189 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 LAG3P18627 525 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 ATP6V1B2P21281 511 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CCND1P24385 295 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 BRCC3P46736 316 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 HSPA13P48723 471 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CLK2P49760 499 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CCR4P51679 360 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 HSPA14Q0VDF9 509 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 DYNC1I2Q13409 638 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 RRP1BQ14684 758 aaKnown RBP6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 KCNA10Q16322 511 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 PARP6Q2NL67 630 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 DUSP28Q4G0W2 176 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 ATAT1Q5SQI0 421 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 FAM46CQ5VWP2 391 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 CYP20A1Q6UW02 462 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 MAB21L3Q8N8X9 362 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 FNDC5Q8NAU1 212 aa6.5□□□□□ -1.37
UBQLN1-206ENST00000533705 IL31RAQ8NI17 732 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms