RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 SDCCAG3Q96C92 435 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 TACO1Q9BSH4 297 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 AGO1Q9UL18 857 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 TDRKHQ9Y2W6 561 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 SNX10Q9Y5X0 201 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 DNTTP04053 509 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 HSPA9P38646 679 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 SATB1Q01826 763 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 BMPR2Q13873 1038 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 MFSD4BQ5TF39 518 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 ZNF470Q6ECI4 717 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.04■□□□□ 0.162e-6■■■■□ 19.7
PPFIA1-222ENST00000532504 OTOAQ7RTW8 1153 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 PRUNE1Q86TP1 453 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 GPAMQ9HCL2 828 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 TMPRSS4Q9NRS4 437 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 CAPN7Q9Y6W3 813 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 STX3Q13277 289 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 HIPK4Q8NE63 616 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 ARMC2Q8NEN0 867 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TMEM159Q96B96 161 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 SLC9A7Q96T83 725 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 CYP4F12Q9HCS2 524 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 SAGE1Q9NXZ1 904 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 LNPEPQ9UIQ6 1025 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 RUVBL2Q9Y230 463 aaKnown RBP16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D3DA0A087WVF3 549 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D3IA0A087WXS9 549 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D3EA0A087X179 549 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D3KA0A087X1G2 549 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D3FA6NER0 549 aaPredicted RBP16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 ZSCAN5CA6NGD5 496 aaPredicted RBP16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D3LB9A6J9 549 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 CLDN11O75508 207 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 AGTP01019 485 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 GALTP07902 379 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D3HP0C7X1 549 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 CAMK2GQ13555 558 aaPredicted RBP16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 KCTD19Q17RG1 926 aaPredicted RBP16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 FSCBQ5H9T9 825 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TXNDC8Q6A555 127 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D3GQ6DHY5 549 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D3CQ6IPX1 549 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 CHST9Q7L1S5 443 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D3Q8IZP1 549 aaPredicted RBP16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 GRID1Q9ULK0 1009 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 EPB42P16452 691 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 CRADDP78560 199 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 CSHL1Q14406 222 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 AGAP9Q5VTM2 703 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 OR52K1Q8NGK4 314 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 RFWD2Q8NHY2 731 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TMEM40Q8WWA1 233 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 ZCWPW1Q9H0M4 648 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 RGS18Q9NS28 235 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 GKN1Q9NS71 199 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 PCDHB9Q9Y5E1 797 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 PECAM1P16284 738 aaPredicted RBP16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 FSHRP23945 695 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 SERPINH1P50454 418 aaKnown RBP16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 RAET1GQ6H3X3 334 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 GRASPQ7Z6J2 395 aaPredicted RBP16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 ADAMTS10Q9H324 1103 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 TRIM33Q9UPN9 1127 aa16.03■□□□□ 0.16
PPFIA1-222ENST00000532504 SUPT7LO94864 414 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 KRT4P19013 534 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 DPYSL3Q14195 570 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 AGMOQ6ZNB7 445 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 STRADAQ7RTN6 431 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 C2orf15Q8WU43 125 aaKnown RBP16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 OR8D1Q8WZ84 308 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 FUBP3Q96I24 572 aaKnown RBP eCLIP16.02■□□□□ 0.163e-8■■■■■ 40.3
PPFIA1-222ENST00000532504 ZCCHC2Q9C0B9 1178 aaKnown RBP16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 SMG5Q9UPR3 1016 aaKnown RBP16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 TJP1Q07157 1748 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 ACSL4O60488 711 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 KCNE1P15382 129 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 PCK1P35558 622 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 DAOAP59103 153 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 LRRC38Q5VT99 294 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 SH3RF2Q8TEC5 729 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 IGSF21Q96ID5 467 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 ZNF670Q9BS34 389 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 PCDH18Q9HCL0 1135 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 L3MBTL1Q9Y468 752 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 MYH3P11055 1940 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 CCDC88AQ3V6T2 1871 aa16.02■□□□□ 0.16
PPFIA1-222ENST00000532504 GPR32O75388 356 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 TMCO4Q5TGY1 634 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 DET1Q7L5Y6 550 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 RUBCNQ92622 972 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 KLHL29Q96CT2 875 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 TWNKQ96RR1 684 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 CDC42EP4Q9H3Q1 356 aaKnown RBP16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 A0A0A0MRY4 1105 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 PAPSS1O43252 624 aaPredicted RBP16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 TIMM44O43615 452 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 STBD1O95210 358 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 ZNF7P17097 686 aaPredicted RBP16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 FAM46CQ5VWP2 391 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms