RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 MUC3BQ9H195 1237 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 FBRSQ9HAH7 460 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 EVLQ9UI08 416 aaPredicted RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 TMEM59LQ9UK28 342 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 VPS28Q9UK41 221 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 I6L893 689 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-213ENST00000527897 RNASEH1O60930 286 aaKnown RBP15.99■□□□□ 0.15
CAPN1-213ENST00000527897 CLDN11O75508 207 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 CNTN5O94779 1100 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 SERPINC1P01008 464 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 UNGP13051 313 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-213ENST00000527897 SDC4P31431 198 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 OXCT1P55809 520 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 GFPT1Q06210 699 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-213ENST00000527897 CLEC16AQ2KHT3 1053 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 C15orf59Q2T9L4 293 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-213ENST00000527897 ACCSLQ4AC99 568 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 ALFQ53S48 1182 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 WDR45BQ5MNZ6 344 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 DCAF12L1Q5VU92 463 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 DAB2IPQ5VWQ8 1189 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 SLC23A3Q6PIS1 610 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 TFAP2DQ7Z6R9 452 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 OR52K2Q8NGK3 314 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 JOSD2Q8TAC2 188 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 CEP76Q8TAP6 659 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 RXFP2Q8WXD0 754 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 AGPAT1Q99943 283 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 SELENOOQ9BVL4 669 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 RTN4Q9NQC3 1192 aaKnown RBP15.99■□□□□ 0.15
CAPN1-213ENST00000527897 SLC25A13Q9UJS0 675 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 SLC6A14Q9UN76 642 aa15.99■□□□□ 0.15
CAPN1-213ENST00000527897 EDDM13A0A1B0GTR0 161 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 FAM47DPA6NHR8 397 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 RHOCP08134 193 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 CCDC172P0C7W6 258 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 GNSP15586 552 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 FERP16591 822 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 ACSL1P33121 698 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 HOXD12P35452 270 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 PSMD8P48556 350 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 CDH4P55283 916 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 SULT2A1Q06520 285 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 KLHL40Q2TBA0 621 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 RAB6CQ53S08 254 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 SH3PXD2AQ5TCZ1 1133 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 RABEPKQ7Z6M1 372 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 MMAAQ8IVH4 418 aaKnown RBP15.98■□□□□ 0.15
CAPN1-213ENST00000527897 STK40Q8N2I9 435 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 PPP1R9BQ96SB3 815 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 BTBD1Q9H0C5 482 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 RAB6CQ9H0N0 254 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 MPP6Q9NZW5 540 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 NCKAP1Q9Y2A7 1128 aa15.98■□□□□ 0.15
CAPN1-213ENST00000527897 NYNRINQ9P2P1 1898 aaKnown RBP15.97■□□□□ 0.15
CAPN1-213ENST00000527897 TARSL2A2RTX5 802 aaKnown RBP15.97■□□□□ 0.15
CAPN1-213ENST00000527897 E9PAM4 449 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 CDX4O14627 284 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-213ENST00000527897 MID1O15344 667 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 BNIP3LO60238 219 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 RNASEH2AO75792 299 aaKnown RBP15.97■□□□□ 0.15
CAPN1-213ENST00000527897 IGLV3-19P01714 112 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 CALB1P05937 261 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 SERPINF2P08697 491 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 KRT3P12035 628 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 VAV1P15498 845 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 TNFAIP3P21580 790 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 TPM4P67936 248 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 ZBTB16Q05516 673 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 PTP4A2Q12974 167 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 CST6Q15828 149 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 CCDC14Q49A88 953 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 C9orf64Q5T6V5 341 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 PEAR1Q5VY43 1037 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-213ENST00000527897 ZCCHC9Q8N567 271 aaKnown RBP15.97■□□□□ 0.15
CAPN1-213ENST00000527897 KDM1BQ8NB78 822 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 CADM4Q8NFZ8 388 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 OR2I1PQ8NGU4 316 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 NAP1L5Q96NT1 182 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-213ENST00000527897 OMDQ99983 421 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 FEM1AQ9BSK4 669 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 FUCA2Q9BTY2 467 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 RSPH9Q9H1X1 276 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-213ENST00000527897 C6orf106Q9H6K1 298 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-213ENST00000527897 FBXL12Q9NXK8 326 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 SUSD2Q9UGT4 822 aa15.97■□□□□ 0.15
CAPN1-213ENST00000527897 EIF2B4Q9UI10 523 aaKnown RBP15.97■□□□□ 0.15
CAPN1-213ENST00000527897 CNOT1A5YKK6 2376 aaKnown RBP15.96■□□□□ 0.15
CAPN1-213ENST00000527897 A0A1W2PP55 124 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 LRRC53A6NM62 1247 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 METTL12A8MUP2 240 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 TMCO5BA8MYB1 307 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 FSBPO95073 299 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 SEMA4FO95754 770 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 IL1BP01584 269 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 PLK1P53350 603 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 IQCB1Q15051 598 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 ASIC2Q16515 512 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 PSAPL1Q6NUJ1 521 aa15.96■□□□□ 0.15
CAPN1-213ENST00000527897 DNAJC24Q6P3W2 148 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms