RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 WASP42768 502 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 GABRB2P47870 512 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 PPP3CCP48454 512 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 PTPN20Q4JDL3 420 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 BROXQ5VW32 411 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 SNX30Q5VWJ9 437 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 BTBD8Q5XKL5 378 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 FBXL19Q6PCT2 694 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 DNAAF5Q86Y56 855 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 PASD1Q8IV76 773 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 DRC7Q8IY82 874 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 SCML4Q8N228 414 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 C1orf131Q8NDD1 294 aaKnown RBP11.36□□□□□ -0.59
NEDD8-204ENST00000526430 ZNF248Q8NDW4 579 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 OR8K1Q8NGG5 319 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 CLEC4CQ8WTT0 213 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 IQCDQ96DY2 449 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 PIWIL1Q96J94 861 aaKnown RBP11.36□□□□□ -0.59
NEDD8-204ENST00000526430 HSFY1Q96LI6 401 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 ACOX2Q99424 681 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 RNF38Q9H0F5 515 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 ITM2CQ9NQX7 267 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 COMMD8Q9NX08 183 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 TAS2R14Q9NYV8 317 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 TRPM5Q9NZQ8 1165 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 EIF2B4Q9UI10 523 aaKnown RBP11.36□□□□□ -0.59
NEDD8-204ENST00000526430 SCML2Q9UQR0 700 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 CPQQ9Y646 472 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 SPTBN1Q01082 2364 aaKnown RBP11.36□□□□□ -0.59
NEDD8-204ENST00000526430 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 DOPEY1Q5JWR5 2465 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 TCRBV5S1A1TA0A578 114 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 MED7O43513 233 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 DFNA5O60443 496 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 OAS1P00973 400 aaKnown RBP11.35□□□□□ -0.59
NEDD8-204ENST00000526430 ERBB2P04626 1255 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 TPM3P06753 285 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 FECHP22830 423 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 YWHAQP27348 245 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 OXTRP30559 389 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 GRIA4P48058 902 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 CSNK1EP49674 416 aaKnown RBP11.35□□□□□ -0.59
NEDD8-204ENST00000526430 TKTL1P51854 596 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 PCBP4P57723 403 aaKnown RBP11.35□□□□□ -0.59
NEDD8-204ENST00000526430 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 C2CD6Q53TS8 623 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 HES3Q5TGS1 186 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 KIAA1324Q6UXG2 1013 aaKnown RBP11.35□□□□□ -0.59
NEDD8-204ENST00000526430 CCDC186Q7Z3E2 898 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 CPA5Q8WXQ8 436 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 ULBP1Q9BZM6 244 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 SLC6A17Q9H1V8 727 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 ABHD10Q9NUJ1 306 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 EHD2Q9NZN4 543 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 CFAP97Q9P2B7 532 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 HESX1Q9UBX0 185 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 SNX11Q9Y5W9 270 aa11.35□□□□□ -0.59
NEDD8-204ENST00000526430 BSNQ9UPA5 3926 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 YJEFN3A6XGL0 299 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 E5RJQ4 531 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 E7ENQ6 273 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 ENC1O14682 589 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 TERTO14746 1132 aaKnown RBP11.34□□□□□ -0.59
NEDD8-204ENST00000526430 RTN3O95197 1032 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-204ENST00000526430 GP1BBP13224 206 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 LCP1P13796 627 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 ANXA13P27216 316 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 DAOAP59103 153 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 ADIGQ0VDE8 80 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 PDCLQ13371 301 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 TRIM14Q14142 442 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 TAF5Q15542 800 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 TEAD4Q15561 434 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 ASIC2Q16515 512 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 CLEC16AQ2KHT3 1053 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 ARHGAP40Q5TG30 622 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 PRICKLE2Q7Z3G6 844 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 TMEM139Q8IV31 216 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 ZNF276Q8N554 614 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 HIC2Q96JB3 615 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 DNAI2Q9GZS0 605 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 CPNE5Q9HCH3 593 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 CYLDQ9NQC7 956 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 ANKMY1Q9P2S6 941 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 ANKRD6Q9Y2G4 727 aa11.34□□□□□ -0.59
NEDD8-204ENST00000526430 A0A087X0T9 212 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 A0A1W2PQH9 124 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 GOLGA6L3A6NEY3 463 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 AKR1B15C9JRZ8 316 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-204ENST00000526430 SCAMP3O14828 347 aaKnown RBP11.33□□□□□ -0.6
NEDD8-204ENST00000526430 CACNG3O60359 315 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 LSM8O95777 96 aaKnown RBP11.33□□□□□ -0.6
NEDD8-204ENST00000526430 ZBED1O96006 694 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 SERPING1P05155 500 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 FAM228BP0C875 321 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 MMP8P22894 467 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 EIF4A3P38919 411 aaKnown RBP11.33□□□□□ -0.6
NEDD8-204ENST00000526430 ACADVLP49748 655 aa11.33□□□□□ -0.6
NEDD8-204ENST00000526430 TPMTP51580 245 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms