RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 NIPA2Q8N8Q9 360 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 TC2NQ8N9U0 490 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 DCAF4L2Q8NA75 395 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 KDM1BQ8NB78 822 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 SPC24Q8NBT2 197 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZBTB44Q8NCP5 570 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 OLIG1Q8TAK6 271 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 WFDC5Q8TCV5 224 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 CYB5D2Q8WUJ1 264 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 GAB3Q8WWW8 586 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 SORCS1Q8WY21 1168 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 RFFLQ8WZ73 363 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 PRCCQ92733 491 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 IGSF8Q969P0 613 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 CHP1Q99653 195 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 GABRG3Q99928 467 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 SPON2Q9BUD6 331 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 DHX35Q9H5Z1 703 aaKnown RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZWILCHQ9H900 591 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ATP13A1Q9HD20 1204 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZDHHC4Q9NPG8 344 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 SPTLC3Q9NUV7 552 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 MPP6Q9NZW5 540 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 CALCOCO1Q9P1Z2 691 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 NCDNQ9UBB6 729 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 EBF1Q9UH73 591 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 SUN2Q9UH99 717 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 PCSK1NQ9UHG2 260 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 GMEB2Q9UKD1 530 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 INTUQ9ULD6 942 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 FZD10Q9ULW2 581 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 CLEC4EQ9ULY5 219 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 USP18Q9UMW8 372 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 SMG5Q9UPR3 1016 aaKnown RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 TBC1D30Q9Y2I9 924 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 FARP1Q9Y4F1 1045 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 SNX10Q9Y5X0 201 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 EDDM13A0A1B0GTR0 161 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ILVBLA1L0T0 632 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 GOLGA6L3A6NEY3 463 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZSCAN5CA6NGD5 496 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 DRGXA6NNA5 263 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 PROB1E7EW31 1015 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 CBX4O00257 560 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 AP5Z1O43299 807 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 NDUFS2O75306 463 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 LRCH4O75427 683 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 CNTN5O94779 1100 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 LRIG2O94898 1065 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 PROSCO94903 275 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 DNTTP04053 509 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 KRT7P08729 469 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 TDGF1P13385 188 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 PRKCHP24723 683 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 MZF1P28698 734 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 MIPP30301 263 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 MAN1A1P33908 653 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 GJC1P36383 396 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ARHGAP25P42331 645 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 MAGEA1P43355 309 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 NOP2P46087 812 aaKnown RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 PXNP49023 591 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 CLCN6P51797 869 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 PLK1P53350 603 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 OGDHQ02218 1023 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 GNA12Q03113 381 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZBTB16Q05516 673 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 DMWDQ09019 674 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 POLD3Q15054 466 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 PARP15Q460N3 678 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 BOLA3Q53S33 107 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ALFQ53S48 1182 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 PPP6R3Q5H9R7 873 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 FSCBQ5H9T9 825 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMEM215Q68D42 235 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF776Q68DI1 518 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 LAIR1Q6GTX8 287 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 CXorf57Q6NSI4 855 aaKnown RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMEM92Q6UXU6 159 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 SLC36A4Q6YBV0 504 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 LPCAT2Q7L5N7 544 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 KIAA1328Q86T90 577 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 METTL3Q86U44 580 aaKnown RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 RASSF3Q86WH2 238 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 MAP7D3Q8IWC1 876 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 APCDD1Q8J025 514 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 RTL3Q8N8U3 475 aaKnown RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ATP11CQ8NB49 1132 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 MDGA1Q8NFP4 955 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 OR2T3Q8NH03 318 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 GANCQ8TET4 914 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 TEKT4Q8WW24 435 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 HSPH1Q92598 858 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ARHGEF26Q96DR7 871 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 MYEOVQ96EZ4 313 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 SIPA1Q96FS4 1042 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 CALR3Q96L12 384 aaKnown RBP5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 ACOX2Q99424 681 aa5.54□□□□□ -1.52
HMGB1P40-201ENST00000525121 BAG1Q99933 345 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms