RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ASB2Q96Q27 587 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 ZC4H2Q9NQZ6 224 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 USP1O94782 785 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 ITGB5P18084 799 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 RPS7P62081 194 aaKnown RBP16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 MRPS35P82673 323 aaKnown RBP16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 CRY1Q16526 586 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 MILR1Q7Z6M3 343 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 TTC7BQ86TV6 843 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 KATNAL2Q8IYT4 538 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 METTL6Q8TCB7 284 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 PHF21BQ96EK2 531 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 SYBUQ9NX95 663 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 NR5A2O00482 541 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 CES2O00748 559 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 ELNP15502 786 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 ACADSP16219 412 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 GLUD2P49448 558 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 ZNF143P52747 638 aaPredicted RBP16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 LLGL2Q6P1M3 1020 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 BNC2Q6ZN30 1099 aaPredicted RBP16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 UBE2E3Q969T4 207 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 VPS33AQ96AX1 596 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 TRIM13O60858 407 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 GSTM1P09488 218 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 DEFA1P59665 94 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 DEFA3P59666 94 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 MRPL28Q13084 256 aaKnown RBP16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 GNA13Q14344 377 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 DENND1CQ8IV53 801 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 BBS4Q96RK4 519 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 TLE6Q9H808 572 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 DERAQ9Y315 318 aa16.54■□□□□ 0.24
PCDHA3-201ENST00000522353 ADH1CP00326 375 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 TARSP26639 723 aaKnown RBP16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 GPR15P49685 360 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 LBX2Q6XYB7 198 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 IL31RAQ8NI17 732 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 INPP4AQ96PE3 977 aaPredicted RBP16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 PURBQ96QR8 312 aaKnown RBP16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 BBS2Q9BXC9 721 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 FAM126AQ9BYI3 521 aaPredicted RBP16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 IL22Q9GZX6 179 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 RNF19AQ9NV58 838 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 TNPO3Q9Y5L0 923 aaKnown RBP16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 A0A096LPK6 155 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 DUSP11O75319 330 aaKnown RBP16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 CXCR2P25025 360 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 AQP5P55064 265 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 IL2P60568 153 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 TRIM60Q495X7 471 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 TTC33Q6PID6 262 aaPredicted RBP16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 ATL1Q8WXF7 558 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 RNPEPQ9H4A4 650 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 AASDHPPTQ9NRN7 309 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 CATSPERZQ9NTU4 200 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 TBC1D23Q9NUY8 699 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 TISP43B9A030 160 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 BTN3A1O00481 513 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 TBL1XO60907 577 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 KDELR1P24390 212 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 PPIGQ13427 754 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 LRRC38Q5VT99 294 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 SPRYD7Q5W111 196 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 EPS8L1Q8TE68 723 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 FUT8Q9BYC5 575 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 SLC40A1Q9NP59 571 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 ARL15Q9NXU5 204 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 ATP9AO75110 1047 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 FARP2O94887 1054 aaPredicted RBP16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 PYGMP11217 842 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 NME5P56597 212 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 NEPROQ6NW34 567 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 TMEM154Q6P9G4 183 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 SLC24A5Q71RS6 500 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 CAVIN3Q969G5 261 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 ELMO3Q96BJ8 720 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 SPACA7Q96KW9 195 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 OPTCQ9UBM4 332 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 VTI1BQ9UEU0 232 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 SNX8Q9Y5X2 465 aa16.53■□□□□ 0.24
PCDHA3-201ENST00000522353 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 BAIAP3O94812 1187 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 GPR1P46091 355 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 IYDQ6PHW0 289 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 CHPFQ8IZ52 775 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 CXorf40BQ96DE9 158 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 MTMR8Q96EF0 704 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 CNGB3Q9NQW8 809 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 USE1Q9NZ43 259 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 PSME2Q9UL46 239 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 RWDD3Q9Y3V2 267 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 LYPLA2O95372 231 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 FGBP02675 491 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 SERPINE1P05121 402 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 ZNF23P17027 643 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 OR1D2P34982 312 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms