RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PCMTD1Q96MG8 357 aaPredicted RBP17.57■□□□□ 0.4
SQLE-205ENST00000521232 BPIFA3Q9BQP9 254 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 NAT10Q9H0A0 1025 aaKnown RBP17.57■□□□□ 0.4
SQLE-205ENST00000521232 SIK2Q9H0K1 926 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 TBC1D30Q9Y2I9 924 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.56■□□□□ 0.4
SQLE-205ENST00000521232 EDDM13A0A1B0GTR0 161 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 FAM170AA1A519 330 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 DRGXA6NNA5 263 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 TTC34A8MYJ7 566 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 GOLGA8SH3BPF8 625 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 ENDOD1O94919 500 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 SYPP08247 313 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 UNGP13051 313 aaPredicted RBP17.56■□□□□ 0.4
SQLE-205ENST00000521232 ACSL1P33121 698 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 MAPK8P45983 427 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 IRAK1P51617 712 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 CDH4P55283 916 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 CENPCQ03188 943 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 ZNF177Q13360 481 aaPredicted RBP17.56■□□□□ 0.4
SQLE-205ENST00000521232 RNF219Q5W0B1 726 aaPredicted RBP17.56■□□□□ 0.4
SQLE-205ENST00000521232 TRIM72Q6ZMU5 477 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 DHX40Q8IX18 779 aaKnown RBP17.56■□□□□ 0.4
SQLE-205ENST00000521232 ZNF683Q8IZ20 524 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 AOPEPQ8N6M6 819 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 PTPRN2Q92932 1015 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 RPL10LQ96L21 214 aaKnown RBP17.56■□□□□ 0.4
SQLE-205ENST00000521232 FEM1AQ9BSK4 669 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 BTBD1Q9H0C5 482 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 FSCN3Q9NQT6 498 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 OR51B4Q9Y5P0 310 aa17.56■□□□□ 0.4
SQLE-205ENST00000521232 A0A1B0GTW7 788 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 MEI4A8MW99 385 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 RNASEH1O60930 286 aaKnown RBP17.55■□□□□ 0.4
SQLE-205ENST00000521232 ATP1A3P13637 1013 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 CSRP1P21291 193 aaKnown RBP17.55■□□□□ 0.4
SQLE-205ENST00000521232 GGCXP38435 758 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 NNMTP40261 264 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 ATXN3P54252 364 aaPredicted RBP17.55■□□□□ 0.4
SQLE-205ENST00000521232 UAP1L1Q3KQV9 507 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 TTC31Q49AM3 519 aaPredicted RBP17.55■□□□□ 0.4
SQLE-205ENST00000521232 ANO6Q4KMQ2 910 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 N4BP2L1Q5TBK1 243 aaPredicted RBP17.55■□□□□ 0.4
SQLE-205ENST00000521232 USP30Q70CQ3 517 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 OR52K2Q8NGK3 314 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 C1orf216Q8TAB5 229 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 SLC30A5Q8TAD4 765 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 CFAP57Q96MR6 1250 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 HAPLN3Q96S86 360 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 PCDHB18PQ96TA0 734 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 FAM129BQ96TA1 746 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 PABPC3Q9H361 631 aaKnown RBP17.55■□□□□ 0.4
SQLE-205ENST00000521232 C6orf106Q9H6K1 298 aaPredicted RBP17.55■□□□□ 0.4
SQLE-205ENST00000521232 SGK2Q9HBY8 427 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 NCKAP1Q9Y2A7 1128 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 DOCK4Q8N1I0 1966 aa17.55■□□□□ 0.4
SQLE-205ENST00000521232 ACACBO00763 2458 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 SMTNL1A8MU46 457 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 UPK3BL1B0FP48 263 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 UPK3BL2E5RIL1 263 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 CNTN5O94779 1100 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 RDXP35241 583 aaKnown RBP17.54■□□□□ 0.4
SQLE-205ENST00000521232 STK19P49842 368 aaPredicted RBP17.54■□□□□ 0.4
SQLE-205ENST00000521232 SFSWAPQ12872 951 aaKnown RBP17.54■□□□□ 0.4
SQLE-205ENST00000521232 PTP4A2Q12974 167 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 ARTNQ5T4W7 220 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 PSAPL1Q6NUJ1 521 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 LRRC31Q6UY01 552 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 FRS2Q8WU20 508 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 GTPBP2Q9BX10 602 aaKnown RBP17.54■□□□□ 0.4
SQLE-205ENST00000521232 METTL5Q9NRN9 209 aaKnown RBP17.54■□□□□ 0.4
SQLE-205ENST00000521232 EIF2B4Q9UI10 523 aaKnown RBP17.54■□□□□ 0.4
SQLE-205ENST00000521232 SNX10Q9Y5X0 201 aa17.54■□□□□ 0.4
SQLE-205ENST00000521232 CHD8Q9HCK8 2581 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 IGLV3-10A0A075B6K4 115 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 BCAT2O15382 392 aaPredicted RBP17.53■□□□□ 0.4
SQLE-205ENST00000521232 SEMA4FO95754 770 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 CEACAM1P13688 526 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 KCNA4P22459 653 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 NOVA1P51513 510 aaKnown RBP17.53■□□□□ 0.4
SQLE-205ENST00000521232 GSCP56915 257 aaPredicted RBP17.53■□□□□ 0.4
SQLE-205ENST00000521232 SEMA3BQ13214 749 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 CST6Q15828 149 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 ALFQ53S48 1182 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 SH3PXD2AQ5TCZ1 1133 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 CAVIN1Q6NZI2 390 aaKnown RBP17.53■□□□□ 0.4
SQLE-205ENST00000521232 PHF13Q86YI8 300 aaPredicted RBP17.53■□□□□ 0.4
SQLE-205ENST00000521232 MMAAQ8IVH4 418 aaKnown RBP17.53■□□□□ 0.4
SQLE-205ENST00000521232 MINDY1Q8N5J2 469 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 EMC1Q8N766 993 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 RXFP2Q8WXD0 754 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 C11orf70Q9BRQ4 267 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 ZDHHC5Q9C0B5 715 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 MIR1-1HGQ9H1L0 117 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 RTN4Q9NQC3 1192 aaKnown RBP17.53■□□□□ 0.4
SQLE-205ENST00000521232 TMPRSS4Q9NRS4 437 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 DNAAF2Q9NVR5 837 aaKnown RBP17.53■□□□□ 0.4
SQLE-205ENST00000521232 FBXL12Q9NXK8 326 aa17.53■□□□□ 0.4
SQLE-205ENST00000521232 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.53■□□□□ 0.4
SQLE-205ENST00000521232 C2CD4BA6NLJ0 364 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms