RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 RAPGEF5Q92565 580 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 DPF3Q92784 378 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 RPGRIP1Q96KN7 1286 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 TBCBQ99426 244 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 NPY6RQ99463 290 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 LBHD1Q9BQE6 289 aaPredicted RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 HERPUD2Q9BSE4 406 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 TNKS2Q9H2K2 1166 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 RBM12Q9NTZ6 932 aaKnown RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 USP18Q9UMW8 372 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 NAALADL1Q9UQQ1 740 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 PCDHB12Q9Y5F1 795 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 V9GYY5 206 aaPredicted RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 FAM92AA1XBS5 289 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 RNF8O76064 485 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 ZRANB2O95218 330 aaKnown RBP eCLIP8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 SEC24AO95486 1093 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 LTFP02788 710 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 CELA3AP09093 270 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 CD8BP10966 210 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 BMPR1AP36894 532 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 ARSEP51690 589 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 SLC5A3P53794 718 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 ATXN1P54253 815 aaKnown RBP8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 BNIP3Q12983 259 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 RAB33AQ14088 237 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 CDO1Q16878 200 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 SLC25A52Q3SY17 297 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 DCAF6Q58WW2 860 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 C9orf50Q5SZB4 431 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 TEX35Q5T0J7 233 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 CCDC181Q5TID7 509 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 BSPRYQ5W0U4 402 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 TPGS2Q68CL5 300 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 MFSD7Q6UXD7 560 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 BEND5Q7L4P6 421 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 C12orf40Q86WS4 652 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 SLC13A5Q86YT5 568 aaPredicted RBP8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 NUP93Q8N1F7 819 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 STKLD1Q8NE28 680 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 ZNF461Q8TAF7 563 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 FAM71BQ8TC56 605 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 SPPL2BQ8TCT7 592 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 FAM172AQ8WUF8 416 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 AUTS2Q8WXX7 1259 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 UBXN4Q92575 508 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 ACSF2Q96CM8 615 aaPredicted RBP8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 SPATA17Q96L03 361 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 SLITRK1Q96PX8 696 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 NOTCH4Q99466 2003 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 AP1M1Q9BXS5 423 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 ZBP1Q9H171 429 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 EPC1Q9H2F5 836 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 ZWILCHQ9H900 591 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 POPDC2Q9HBU9 364 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 RXFP1Q9HBX9 757 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 NGRNQ9NPE2 291 aaKnown RBP8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 KLHL11Q9NVR0 708 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 DDX56Q9NY93 547 aaKnown RBP8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 AFF4Q9UHB7 1163 aaKnown RBP8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 PCSK1NQ9UHG2 260 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 SCML2Q9UQR0 700 aa8.16□□□□□ -1.1
CTHRC1-203ENST00000520337 LINC01553A4QN01 128 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 GRXCR1A8MXD5 290 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 PI4K2BG5E9Z4 385 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 KRIT1O00522 736 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 KRT7P08729 469 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 CD48P09326 243 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 CTSAP10619 480 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 RALAP11233 206 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 MYOGP15173 224 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 ZNF16P17020 682 aaPredicted RBP8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 ATF6P18850 670 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 KDELR1P24390 212 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 PTPN7P35236 360 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 GJC1P36383 396 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 CDKN2BP42772 138 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 MAGEA10P43363 369 aaPredicted RBP8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 KRT17Q04695 432 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 ADCY2Q08462 1091 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 KLF1Q13351 362 aaPredicted RBP8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 EIF4EBP2Q13542 120 aaPredicted RBP8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 LLGL1Q15334 1064 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 SHHQ15465 462 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 ELF2Q15723 593 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 CYP1B1Q16678 543 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 HADHQ16836 314 aaKnown RBP8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 LONRF2Q1L5Z9 754 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 SMTNL2Q2TAL5 461 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 MGAT5BQ3V5L5 792 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 KCNT1Q5JUK3 1230 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 SEL1L2Q5TEA6 688 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 FAM109BQ6ICB4 259 aaPredicted RBP8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 FBXO38Q6PIJ6 1188 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 SPOCD1Q6ZMY3 1216 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 FAM214BQ7L5A3 538 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 STRADAQ7RTN6 431 aa8.15□□□□□ -1.1
CTHRC1-203ENST00000520337 ADAT2Q7Z6V5 191 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms