RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 FEM1AQ9BSK4 669 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 EDEM3Q9BZQ6 932 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 NDFIP2Q9NV92 336 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 USP36Q9P275 1121 aaKnown RBP13.7□□□□□ -0.22
VEGFA-219ENST00000518824 NEU3Q9UQ49 428 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 CEP250Q9BV73 2442 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 SPTBN4Q9H254 2564 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-219ENST00000518824 A0A0D9SEW6 157 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 MAP3K13O43283 966 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 SNAP91O60641 907 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 CAVIN2O95810 425 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 FTLP02792 175 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-219ENST00000518824 CCDC172P0C7W6 258 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 GLDCP23378 1020 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 ITPKAP23677 461 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 ADRA1BP35368 520 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 TPMTP51580 245 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 PLK1P53350 603 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 CDH4P55283 916 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 RPS14P62263 151 aaKnown RBP13.69□□□□□ -0.22
VEGFA-219ENST00000518824 ECT2LQ008S8 904 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 RPL6Q02878 288 aaKnown RBP13.69□□□□□ -0.22
VEGFA-219ENST00000518824 ZNF252P-AS1Q0IIN9 211 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 ZNF177Q13360 481 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-219ENST00000518824 MAMLD1Q13495 774 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 RSPO4Q2I0M5 234 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-219ENST00000518824 C9orf64Q5T6V5 341 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 TTC39BQ5VTQ0 682 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-219ENST00000518824 STRADAQ7RTN6 431 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 FAM124AQ86V42 546 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 ARFGAP1Q8N6T3 406 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 OR7D4Q8NG98 312 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 PIGKQ92643 395 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 SPACA7Q96KW9 195 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 C1orf74Q96LT6 269 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 HAPLN3Q96S86 360 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 FSCN3Q9NQT6 498 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 ITM2CQ9NQX7 267 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 CAPN11Q9UMQ6 739 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 TBC1D30Q9Y2I9 924 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 ACTL7AQ9Y615 435 aa13.69□□□□□ -0.22
VEGFA-219ENST00000518824 A0A1W2PQJ5 194 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 K7ERQ8 282 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 CLDN11O75508 207 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 MT-CO1P00395 513 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 ASLP04424 464 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 ZNF806P0C7X5 589 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 MAOBP27338 520 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 CASP14P31944 242 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 ZNF143P52747 638 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-219ENST00000518824 HNRNPA1L2Q32P51 320 aaKnown RBP13.68□□□□□ -0.22
VEGFA-219ENST00000518824 MANEALQ5VSG8 457 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 DAB2IPQ5VWQ8 1189 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 PLEKHA7Q6IQ23 1121 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 LPCAT2Q7L5N7 544 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 CCDC117Q8IWD4 279 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-219ENST00000518824 ZNF557Q8N988 423 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-219ENST00000518824 FRS2Q8WU20 508 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 PRCCQ92733 491 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-219ENST00000518824 PTPRN2Q92932 1015 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 TOE1Q96GM8 510 aaKnown RBP13.68□□□□□ -0.22
VEGFA-219ENST00000518824 FAM129BQ96TA1 746 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 GPATCH2LQ9NWQ4 482 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 WSB2Q9NYS7 404 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-219ENST00000518824 SERGEFQ9UGK8 458 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 SLCO1B1Q9Y6L6 691 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 ADAMTS9Q9P2N4 1935 aa13.68□□□□□ -0.22
VEGFA-219ENST00000518824 ITIH6Q6UXX5 1313 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-219ENST00000518824 RNF103O00237 685 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 ZBTB24O43167 697 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-219ENST00000518824 LRP3O75074 770 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 ZNF217O75362 1048 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 MOCS3O95396 460 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 RHOCP08134 193 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 SRPRAP08240 638 aaKnown RBP13.67□□□□□ -0.22
VEGFA-219ENST00000518824 ACSL1P33121 698 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 METAP1P53582 386 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 ZBED6P86452 979 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 TDRD12Q587J7 1177 aaKnown RBP13.67□□□□□ -0.22
VEGFA-219ENST00000518824 SCYL2Q6P3W7 929 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 CYP2U1Q7Z449 544 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 METTL3Q86U44 580 aaKnown RBP13.67□□□□□ -0.22
VEGFA-219ENST00000518824 STK40Q8N2I9 435 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 HSPA12BQ96MM6 686 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 PEBP4Q96S96 227 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 GPR174Q9BXC1 333 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 ARHGAP20Q9P2F6 1191 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 MYO1AQ9UBC5 1043 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 OR12D3Q9UGF7 316 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 SUN2Q9UH99 717 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 ADAMTS1Q9UHI8 967 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 PCDHGA5Q9Y5G8 931 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 DCHS1Q96JQ0 3298 aa13.67□□□□□ -0.22
VEGFA-219ENST00000518824 CHD5Q8TDI0 1954 aa13.66□□□□□ -0.22
VEGFA-219ENST00000518824 A0A087X0T9 212 aa13.66□□□□□ -0.22
VEGFA-219ENST00000518824 PLK4O00444 970 aa13.66□□□□□ -0.22
VEGFA-219ENST00000518824 SMAD6O43541 496 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms