RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 GHRHRQ02643 423 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 STIM1Q13586 685 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 SEMA3AQ14563 771 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 INTS11Q5TA45 600 aaKnown RBP4.94□□□□□ -1.62
SQLE-202ENST00000518604 ATG16L1Q676U5 607 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 AADACL2Q6P093 401 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 MTFR2Q6P444 385 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 ZNF66Q6ZN08 573 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 RTL10Q7L3V2 364 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 PAF1Q8N7H5 531 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 KCNJ9Q92806 393 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 CRAMP1Q96RY5 1269 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 HERC2P3Q9BVR0 1158 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 PTGFRNQ9P2B2 879 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 AFG3L2Q9Y4W6 797 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 POLR2AP24928 1970 aaKnown RBP4.94□□□□□ -1.62
SQLE-202ENST00000518604 KAT6AQ92794 2004 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 KLK10O43240 276 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 DHX16O60231 1041 aaKnown RBP4.93□□□□□ -1.62
SQLE-202ENST00000518604 GUCY1B2O75343 617 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 LCKP06239 509 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 CPA1P15085 419 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 ARSAP15289 507 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 GSTM2P28161 218 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 PSMC2P35998 433 aaKnown RBP4.93□□□□□ -1.62
SQLE-202ENST00000518604 RPS13P62277 151 aaKnown RBP4.93□□□□□ -1.62
SQLE-202ENST00000518604 CFHR1Q03591 330 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 MAPK7Q13164 816 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 TBX2Q13207 712 aaPredicted RBP4.93□□□□□ -1.62
SQLE-202ENST00000518604 DLGAP5Q15398 846 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 SLC9C1Q4G0N8 1177 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 GXYLT1Q4G148 440 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 CEP78Q5JTW2 689 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 SYCE2Q6PIF2 218 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 DEF8Q6ZN54 512 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 KLBQ86Z14 1044 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 TMTC1Q8IUR5 882 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 NAXEQ8NCW5 288 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 NCSTNQ92542 709 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 CLMNQ96JQ2 1002 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 ADAD1Q96M93 576 aaKnown RBP4.93□□□□□ -1.62
SQLE-202ENST00000518604 PPM1MQ96MI6 270 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 HDHD5Q9BXW7 423 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 TAOK3Q9H2K8 898 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 MLXIPLQ9NP71 852 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.93□□□□□ -1.62
SQLE-202ENST00000518604 GGA3Q9NZ52 723 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 SLC8A2Q9UPR5 921 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 CRYL1Q9Y2S2 319 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 TMEM98Q9Y2Y6 226 aa4.93□□□□□ -1.62
SQLE-202ENST00000518604 SLC22A23A1A5C7 686 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 C2CD4BA6NLJ0 364 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 PRPF4O43172 522 aaKnown RBP eCLIP4.92□□□□□ -1.62
SQLE-202ENST00000518604 BCAR3O75815 825 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 IFIT1P09914 478 aaKnown RBP4.92□□□□□ -1.62
SQLE-202ENST00000518604 AVPR2P30518 371 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 GPD2P43304 727 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 ARHGAP8P85298 464 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 DAZAP2Q15038 168 aaPredicted RBP4.92□□□□□ -1.62
SQLE-202ENST00000518604 PLK5Q496M5 336 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 JAKMIP3Q5VZ66 844 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 ISM2Q6H9L7 571 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 SLC30A9Q6PML9 568 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 FAM57BQ71RH2 274 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 LRRC8DQ7L1W4 858 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 NEK8Q86SG6 692 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 ESX1Q8N693 406 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 ARL14EPQ8N8R7 260 aaPredicted RBP4.92□□□□□ -1.62
SQLE-202ENST00000518604 FAM110DQ8TAY7 271 aaPredicted RBP4.92□□□□□ -1.62
SQLE-202ENST00000518604 EVI5LQ96CN4 794 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 GPR63Q9BZJ6 419 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 MOV10Q9HCE1 1003 aaKnown RBP4.92□□□□□ -1.62
SQLE-202ENST00000518604 TMEM248Q9NWD8 314 aa4.92□□□□□ -1.62
SQLE-202ENST00000518604 SMIM35A0A1B0GVV1 85 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 EYA2O00167 538 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 PEX12O00623 359 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 SYN3O14994 580 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 TULP3O75386 442 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 AGR2O95994 175 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 CELA2AP08217 269 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 WEE2P0C1S8 567 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 CTSAP10619 480 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 ATP5F1P24539 256 aaPredicted RBP4.91□□□□□ -1.62
SQLE-202ENST00000518604 EPHB2P29323 1055 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 CHRNA5P30532 468 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 DDIT3P35638 169 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 GJC1P36383 396 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 PGM1P36871 562 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 NANOS3P60323 173 aaKnown RBP4.91□□□□□ -1.62
SQLE-202ENST00000518604 RHAGQ02094 409 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 KIAA1755Q5JYT7 1200 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 SLC18B1Q6NT16 456 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 RETSATQ6NUM9 610 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 LRIG3Q6UXM1 1119 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 BRSK2Q8IWQ3 736 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 VPS52Q8N1B4 723 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 TSPYL6Q8N831 410 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 HTRA1Q92743 480 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 CUL5Q93034 780 aa4.91□□□□□ -1.62
SQLE-202ENST00000518604 HVCN1Q96D96 273 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms