RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 LAMB1P07942 1786 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 PRR23AA6NEV1 266 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 C2orf81A6NN90 581 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 TYROBPO43914 113 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 PGM3O95394 542 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 ALDH2P05091 517 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 SERPINE1P05121 402 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 SERPINA6P08185 405 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 CPA3P15088 417 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 ITGA9Q13797 1035 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 INPP5AQ14642 412 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 TNFAIP8L3Q5GJ75 292 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 RRM2BQ7LG56 351 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 PIWIL2Q8TC59 973 aaKnown RBP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 LRRN4Q8WUT4 740 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 PPP1R2P1Q96PQ5 205 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 PNMA8BQ9ULN7 279 aaPredicted RBP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 CFAP99D6REC4 459 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 TRDMT1O14717 391 aaKnown RBP11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 DCXO43602 365 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 LYPLA1O75608 230 aaPredicted RBP11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 ZMPSTE24O75844 475 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 LRG1P02750 347 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 BDNFP23560 247 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 CELF3Q5SZQ8 465 aaKnown RBP11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 LPCAT4Q643R3 524 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 CDCA2Q69YH5 1023 aaPredicted RBP11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 TXNRD3NBQ6F5E7 133 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 SNX31Q8N9S9 440 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 DDI1Q8WTU0 396 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 HTR3CQ8WXA8 447 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 LZICQ8WZA0 190 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 DACH2Q96NX9 599 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 GPAMQ9HCL2 828 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 TRMT6Q9UJA5 497 aaKnown RBP11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 VPS28Q9UK41 221 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 IRS2Q9Y4H2 1338 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 WDR27A2RRH5 827 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 XPO1O14980 1071 aaKnown RBP11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 TMEM63AO94886 807 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 ATP5BP06576 529 aaKnown RBP11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 USP17L7P0C7H9 530 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 GRK2P25098 689 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 CCR1P32246 355 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 EEF1DP3Q658K8 133 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 RIOX2Q8IUF8 465 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 CARNMT1Q8N4J0 409 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 DENND1AQ8TEH3 1009 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 ZNF516Q92618 1163 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 CEP19Q96LK0 163 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 ETNK2Q9NVF9 386 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 DDX18Q9NVP1 670 aaKnown RBP11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 CLIC5Q9NZA1 410 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 PLLPQ9Y342 182 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 CNTFP26441 200 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 MGAT1P26572 445 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 ABCG1P45844 678 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 SLC6A3Q01959 620 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 PDK3Q15120 406 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 MARC1Q5VT66 337 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 TBCBQ99426 244 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 NDNQ99608 321 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 CCT7Q99832 543 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 NMRK2Q9NPI5 230 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 TRPM5Q9NZQ8 1165 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 PACSIN3Q9UKS6 424 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 PCDHB8Q9UN66 801 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 CCDC189A1A4V9 331 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 RNF103O00237 685 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 SOAT2O75908 522 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 CD48P09326 243 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 JAG1P78504 1218 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 FSCN1Q16658 493 aaKnown RBP11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 FAM171A1Q5VUB5 890 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 PGBD3Q8N328 593 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 DCAKDQ8WVC6 231 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 USP6NLQ92738 828 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 PHF21BQ96EK2 531 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 NRDE2Q9H7Z3 1164 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 COMMD3-BMI1R4GMX3 469 aa11.05□□□□□ -0.64
PCDHGA1-202ENST00000517417 RREB1Q92766 1687 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 TCRBV7S3A2A0A539 114 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 A6NHS1 94 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 ERI2A8K979 691 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 MYO1GB0I1T2 1018 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 VAPBO95292 243 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 SERPINB8P50452 374 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 TUBP50607 506 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 CCNG1P51959 295 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 KCNK10P57789 538 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 FUT11Q495W5 492 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 MSS51Q4VC12 460 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 TAF2Q6P1X5 1199 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 BNC2Q6ZN30 1099 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 NUDT18Q6ZVK8 323 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 SNRNP27Q8WVK2 155 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 OTULINQ96BN8 352 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 MIPEPQ99797 713 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms