RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 GALNSP34059 522 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 VPS41P49754 854 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 MXI1P50539 228 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 LINC00315P59091 139 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 IQCB1Q15051 598 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 ENTPD8Q5MY95 495 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 RNF180Q86T96 592 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 SATL1Q86VE3 508 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 DDX42Q86XP3 938 aaKnown RBP eCLIP-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 RHPN2Q8IUC4 686 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 MIGA1Q8NAN2 632 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 OR2T6Q8NHC8 308 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 RFWD2Q8NHY2 731 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 KAT2AQ92830 837 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 FAM104AQ969W3 186 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 MRGPRX4Q96LA9 322 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 TTC14Q96N46 770 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 C7orf25Q9BPX7 421 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 SENP7Q9BQF6 1050 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 GPATCH1Q9BRR8 931 aaKnown RBP-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 TNFRSF19Q9NS68 423 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 ABCF3Q9NUQ8 709 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 ASNSD1Q9NWL6 643 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 LRFN1Q9P244 771 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 CFAP97Q9P2B7 532 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF107Q9UII5 783 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 EXOGQ9Y2C4 368 aaKnown RBP-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 COL1A2P08123 1366 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 MYO16Q9Y6X6 1858 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 CGNL1Q0VF96 1302 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 A0A1W2PP11 408 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 C1orf226A1L170 272 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 PRYO14603 147 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 HDAC3O15379 428 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZEB2O60315 1214 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 MARCH6O60337 910 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 F2P00734 622 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 IGKV1D-16P01601 117 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 MELTFP08582 738 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 ARL14EPLP0DKL9 152 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 ERVK-10P10266 1014 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 ATP6V1B1P15313 513 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 TYMPP19971 482 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 HOXA1P49639 335 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 MRPS9P82933 396 aaKnown RBP-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 SSRP1Q08945 709 aaKnown RBP-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 GBX1Q14549 363 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 SF3A2Q15428 464 aaKnown RBP-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 CDCA2Q69YH5 1023 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 LRIG3Q6UXM1 1119 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 GADL1Q6ZQY3 521 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 KCNK18Q7Z418 384 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 MB21D2Q8IYB1 491 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 LYPD1Q8N2G4 141 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZFPM2Q8WW38 1151 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 PRR11Q96HE9 360 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 TXNDC15Q96J42 360 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 DMRTA2Q96SC8 542 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 MRPL4Q9BYD3 311 aaKnown RBP-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF700Q9H0M5 742 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 QRSL1Q9H0R6 528 aaKnown RBP-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 PARLQ9H300 379 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 IL21RQ9HBE5 538 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 SPTLC3Q9NUV7 552 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 IFT57Q9NWB7 429 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 HDAC6Q9UBN7 1215 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF180Q9UJW8 692 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 DNM3Q9UQ16 869 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 PLAAQ9Y263 795 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 PCDHGA2Q9Y5H1 932 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 PRAG1Q86YV5 1406 aa-0.59□□□□□ -2.5
RNU6-539P-201ENST00000516665 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.6□□□□□ -2.5
RNU6-539P-201ENST00000516665 USP24Q9UPU5 2620 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 KIAA1210Q9ULL0 1709 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 NT5C1B-RDH14C9J2C7 533 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 ZNF587BE7ETH6 402 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 DHX16O60231 1041 aaKnown RBP-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 GNAI2P04899 355 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 SSBP05455 408 aaKnown RBP eCLIP-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 GNAI3P08754 354 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 JMJD7P0C870 316 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 ZNF84P51523 738 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 BCAT1P54687 386 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 GNAI1P63096 354 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 CDC42EP1Q00587 391 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 GAB1Q13480 694 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 KIF22Q14807 665 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 ZNF79Q15937 498 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 ANO4Q32M45 955 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 BROXQ5VW32 411 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 NOP9Q86U38 636 aaKnown RBP-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 RAB11FIP4Q86YS3 637 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 ZNF614Q8N883 585 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 ATP11CQ8NB49 1132 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 GJA10Q969M2 543 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 TEX13BQ9BXU2 312 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 FGFBP2Q9BYJ0 223 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 BACH2Q9BYV9 841 aa-0.6□□□□□ -2.51
RNU6-539P-201ENST00000516665 CYTL1Q9NRR1 136 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms