RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ASIC2Q16515 512 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 UAP1L1Q3KQV9 507 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 TRIM61Q5EBN2 209 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 BRMS1LQ5PSV4 323 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 C9orf64Q5T6V5 341 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 FAM72AQ5TYM5 149 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 FAM72DQ6L9T8 149 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 TRIM72Q6ZMU5 477 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 MON1BQ7L1V2 547 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 ZNF571Q7Z3V5 609 aaPredicted RBP11.83□□□□□ -0.52
VCAN-212ENST00000515397 BNIPLQ7Z465 357 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 FAM72BQ86X60 149 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 PHF13Q86YI8 300 aaPredicted RBP11.83□□□□□ -0.52
VCAN-212ENST00000515397 SYT12Q8IV01 421 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 MMAAQ8IVH4 418 aaKnown RBP11.83□□□□□ -0.52
VCAN-212ENST00000515397 STK40Q8N2I9 435 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 OR2I1PQ8NGU4 316 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 GANCQ8TET4 914 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 ALG14Q96F25 216 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 FAM129BQ96TA1 746 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 FEM1AQ9BSK4 669 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 SELENOOQ9BVL4 669 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 IRX2Q9BZI1 471 aaPredicted RBP11.83□□□□□ -0.52
VCAN-212ENST00000515397 MIR1-1HGQ9H1L0 117 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 HAUS4Q9H6D7 363 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 USP36Q9P275 1121 aaKnown RBP11.83□□□□□ -0.52
VCAN-212ENST00000515397 PILRBQ9UKJ0 227 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 DAAM1Q9Y4D1 1078 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 SLCO1B1Q9Y6L6 691 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 CACNA1AO00555 2505 aa11.83□□□□□ -0.52
VCAN-212ENST00000515397 LNP1A1A4G5 178 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 FAM47DPA6NHR8 397 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 DRGXA6NNA5 263 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 K7ERQ8 282 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 PLK4O00444 970 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 MID1O15344 667 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 ENDOD1O94919 500 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 ASLP04424 464 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 GLDCP23378 1020 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 SDC4P31431 198 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 METAP1P53582 386 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 HDAC4P56524 1084 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 HNRNPA1L2Q32P51 320 aaKnown RBP11.82□□□□□ -0.52
VCAN-212ENST00000515397 POM121L1PQ3SYA9 428 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 ACCSLQ4AC99 568 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 SFMBT2Q5VUG0 894 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 ACAD10Q6JQN1 1059 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 SCYL2Q6P3W7 929 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 LRRC31Q6UY01 552 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 LINGO4Q6UY18 593 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 DRC7Q8IY82 874 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 MCOLN2Q8IZK6 566 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 PYROXD2Q8N2H3 581 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 CCDC185Q8N715 623 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 OR7D4Q8NG98 312 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 NETO1Q8TDF5 533 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 FAM172AQ8WUF8 416 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 PTPRN2Q92932 1015 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 ZNF419Q96HQ0 510 aaPredicted RBP11.82□□□□□ -0.52
VCAN-212ENST00000515397 MCEEQ96PE7 176 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 SYT11Q9BT88 431 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 SPON2Q9BUD6 331 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 EDEM2Q9BV94 578 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 MUC3BQ9H195 1237 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 C6orf106Q9H6K1 298 aaPredicted RBP11.82□□□□□ -0.52
VCAN-212ENST00000515397 IFNKQ9P0W0 207 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 SERGEFQ9UGK8 458 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 VPS28Q9UK41 221 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 OR51B4Q9Y5P0 310 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 ACTL7AQ9Y615 435 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 LAMA1P25391 3075 aa11.82□□□□□ -0.52
VCAN-212ENST00000515397 PI4KAP42356 2102 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 NUP205Q92621 2012 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 A0A1W2PQC6 194 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 TCRBV5S1A1TA0A578 114 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 SIGLEC16A6NMB1 481 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 GOLGA6L19H0YKK7 550 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 DDX3XO00571 662 aaKnown RBP eCLIP11.81□□□□□ -0.52
VCAN-212ENST00000515397 CDX4O14627 284 aaPredicted RBP11.81□□□□□ -0.52
VCAN-212ENST00000515397 SLC30A4O14863 429 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 CLDN11O75508 207 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 DNTTP04053 509 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 CALB1P05937 261 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 RHOCP08134 193 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 GPD1P21695 349 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 ADRA1BP35368 520 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 PSMD8P48556 350 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 CDH4P55283 916 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 OGDHQ02218 1023 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 E2F5Q15329 346 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 DLG2Q15700 870 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 DCAF12L1Q5VU92 463 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 ZNF776Q68DI1 518 aaPredicted RBP11.81□□□□□ -0.52
VCAN-212ENST00000515397 RWDD4Q6NW29 188 aaKnown RBP11.81□□□□□ -0.52
VCAN-212ENST00000515397 DNAJC24Q6P3W2 148 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 METTL3Q86U44 580 aaKnown RBP11.81□□□□□ -0.52
VCAN-212ENST00000515397 ZNF557Q8N988 423 aaPredicted RBP11.81□□□□□ -0.52
VCAN-212ENST00000515397 FRS2Q8WU20 508 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 SNX19Q92543 992 aa11.81□□□□□ -0.52
VCAN-212ENST00000515397 HAPLN3Q96S86 360 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms