RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 CCDC73Q6ZRK6 1079 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 BHLHA9Q7RTU4 235 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 PIGZQ86VD9 579 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 TRIM69Q86WT6 500 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 MFN1Q8IWA4 741 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 NELFCDQ8IXH7 590 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 C12orf56Q8IXR9 622 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 WDR36Q8NI36 951 aaKnown RBP12.23□□□□□ -0.45
CSF1R-208ENST00000515239 TAF4BQ92750 862 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 ARRDC3Q96B67 414 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 IRX2Q9BZI1 471 aaPredicted RBP12.23□□□□□ -0.45
CSF1R-208ENST00000515239 NEMP2A6NFY4 417 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 CASC3O15234 703 aaKnown RBP12.22□□□□□ -0.45
CSF1R-208ENST00000515239 RNGTTO60942 597 aaKnown RBP12.22□□□□□ -0.45
CSF1R-208ENST00000515239 NEBLO76041 1014 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 HSP90AA1P07900 732 aaKnown RBP12.22□□□□□ -0.45
CSF1R-208ENST00000515239 SRPRAP08240 638 aaKnown RBP12.22□□□□□ -0.45
CSF1R-208ENST00000515239 ITGA2BP08514 1039 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 ALPPL2P10696 532 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 TRIM21P19474 475 aaKnown RBP12.22□□□□□ -0.45
CSF1R-208ENST00000515239 MZF1P28698 734 aaPredicted RBP12.22□□□□□ -0.45
CSF1R-208ENST00000515239 GJB2P29033 226 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 STAT6P42226 847 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 TKTL1P51854 596 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 IGFBP7Q16270 282 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 TBR1Q16650 682 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 CDKN3Q16667 212 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 FAM133BQ5BKY9 247 aaKnown RBP12.22□□□□□ -0.45
CSF1R-208ENST00000515239 FSCBQ5H9T9 825 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 MMS22LQ6ZRQ5 1243 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 DUSP23Q9BVJ7 150 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 OLA1Q9NTK5 396 aaKnown RBP12.22□□□□□ -0.45
CSF1R-208ENST00000515239 STIM2Q9P246 746 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 SARDHQ9UL12 918 aa12.22□□□□□ -0.45
CSF1R-208ENST00000515239 RP1P56715 2156 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.21□□□□□ -0.45
CSF1R-208ENST00000515239 CPED1A4D0V7 1026 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 MSI1O43347 362 aaKnown RBP12.21□□□□□ -0.45
CSF1R-208ENST00000515239 EXOC3O60645 756 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 PPFIA2O75334 1257 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 ZBED1O96006 694 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 VAV1P15498 845 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 SLC5A2P31639 672 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 TXLNAP40222 546 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 PDX1P52945 283 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 ZNF177Q13360 481 aaPredicted RBP12.21□□□□□ -0.45
CSF1R-208ENST00000515239 SETMARQ53H47 684 aaPredicted RBP12.21□□□□□ -0.45
CSF1R-208ENST00000515239 BSPRYQ5W0U4 402 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 GUSBP11Q6P575 273 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 RBM44Q6ZP01 1051 aaKnown RBP12.21□□□□□ -0.45
CSF1R-208ENST00000515239 SV2AQ7L0J3 742 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 BRAPQ7Z569 592 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 ZNF557Q8N988 423 aaPredicted RBP12.21□□□□□ -0.45
CSF1R-208ENST00000515239 TPCN2Q8NHX9 752 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 EDEM1Q92611 657 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 MYEOVQ96EZ4 313 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 RPL10LQ96L21 214 aaKnown RBP12.21□□□□□ -0.45
CSF1R-208ENST00000515239 NOX5Q96PH1 765 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 ULBP1Q9BZM6 244 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 SLC25A18Q9H1K4 315 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 CYP3A43Q9HB55 503 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 APOBEC3GQ9HC16 384 aaKnown RBP12.21□□□□□ -0.45
CSF1R-208ENST00000515239 GEMIN8Q9NWZ8 242 aaKnown RBP12.21□□□□□ -0.45
CSF1R-208ENST00000515239 KCNK4Q9NYG8 393 aa12.21□□□□□ -0.45
CSF1R-208ENST00000515239 TFIP11Q9UBB9 837 aaKnown RBP12.21□□□□□ -0.45
CSF1R-208ENST00000515239 EME2A4GXA9 379 aaPredicted RBP12.2□□□□□ -0.46
CSF1R-208ENST00000515239 SLC31A1O15431 190 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 IRAK2O43187 625 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 SLC7A4O43246 635 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 TCEA3O75764 348 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 RPS24P62847 133 aaKnown RBP12.2□□□□□ -0.46
CSF1R-208ENST00000515239 FOXK1P85037 733 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 ECT2LQ008S8 904 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 CNTN1Q12860 1018 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 ELAVL3Q14576 367 aaKnown RBP12.2□□□□□ -0.46
CSF1R-208ENST00000515239 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 ZNF542PQ5EBM4 170 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 PITRM1Q5JRX3 1037 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 FAM26FQ5R3K3 315 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 AGBL4Q5VU57 503 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 NADSYN1Q6IA69 706 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 ZCCHC8Q6NZY4 707 aaKnown RBP12.2□□□□□ -0.46
CSF1R-208ENST00000515239 EFL1Q7Z2Z2 1120 aaKnown RBP12.2□□□□□ -0.46
CSF1R-208ENST00000515239 SLC22A18ASQ8N1D0 253 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 OR13H1Q8NG92 308 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 RNF139Q8WU17 664 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 IFT43Q96FT9 208 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 HEXIM2Q96MH2 286 aaKnown RBP12.2□□□□□ -0.46
CSF1R-208ENST00000515239 EPN3Q9H201 632 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 EVA1BQ9NVM1 165 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 KBTBD4Q9NVX7 518 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 WDR70Q9NW82 654 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 CGNQ9P2M7 1197 aaKnown RBP12.2□□□□□ -0.46
CSF1R-208ENST00000515239 PAXBP1Q9Y5B6 917 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 PCDHGA7Q9Y5G6 932 aa12.2□□□□□ -0.46
CSF1R-208ENST00000515239 UTP20O75691 2785 aaKnown RBP12.19□□□□□ -0.46
CSF1R-208ENST00000515239 UBE4BO95155 1302 aa12.19□□□□□ -0.46
CSF1R-208ENST00000515239 CCDC187A0A096LP49 1063 aa12.19□□□□□ -0.46
CSF1R-208ENST00000515239 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
CSF1R-208ENST00000515239 ENO4A6NNW6 628 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms