RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ANLNQ9NQW6 1124 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 SLCO3A1Q9UIG8 710 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 TARSL2A2RTX5 802 aaKnown RBP25.22■■□□□ 1.63
SNF8-213ENST00000514929 C7P10643 843 aa25.22■■□□□ 1.63
SNF8-213ENST00000514929 RDXP35241 583 aaKnown RBP25.22■■□□□ 1.63
SNF8-213ENST00000514929 NSFP46459 744 aaKnown RBP25.22■■□□□ 1.63
SNF8-213ENST00000514929 STK19P49842 368 aaPredicted RBP25.22■■□□□ 1.63
SNF8-213ENST00000514929 PLK1P53350 603 aa25.22■■□□□ 1.63
SNF8-213ENST00000514929 ARID5BQ14865 1188 aa25.22■■□□□ 1.63
SNF8-213ENST00000514929 DCAF12L1Q5VU92 463 aa25.22■■□□□ 1.63
SNF8-213ENST00000514929 LRRC31Q6UY01 552 aa25.22■■□□□ 1.63
SNF8-213ENST00000514929 GTPBP2Q9BX10 602 aaKnown RBP25.22■■□□□ 1.63
SNF8-213ENST00000514929 MIR1-1HGQ9H1L0 117 aa25.22■■□□□ 1.63
SNF8-213ENST00000514929 CAPN10Q9HC96 672 aa25.22■■□□□ 1.63
SNF8-213ENST00000514929 SEPT11Q9NVA2 429 aaKnown RBP25.22■■□□□ 1.63
SNF8-213ENST00000514929 ITIH6Q6UXX5 1313 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 EDDM13A0A1B0GTR0 161 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 METTL12A8MUP2 240 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 I6L893 689 aaPredicted RBP25.21■■□□□ 1.63
SNF8-213ENST00000514929 UNGP13051 313 aaPredicted RBP25.21■■□□□ 1.63
SNF8-213ENST00000514929 ACSL1P33121 698 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 ZNF165P49910 485 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 CDH4P55283 916 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 C5orf22Q49AR2 442 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 C9orf64Q5T6V5 341 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 ACBD5Q5T8D3 534 aaPredicted RBP25.21■■□□□ 1.63
SNF8-213ENST00000514929 GANCQ8TET4 914 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 DNASE2BQ8WZ79 361 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 PCDHB18PQ96TA0 734 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 BTBD1Q9H0C5 482 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 SCML1Q9UN30 329 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 NCKAP1Q9Y2A7 1128 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 SNX10Q9Y5X0 201 aa25.21■■□□□ 1.63
SNF8-213ENST00000514929 PI4KAP42356 2102 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 ATP11AP98196 1134 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 CLEC16AQ2KHT3 1053 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 FILIP1LQ4L180 1135 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 LRSAM1Q6UWE0 723 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 FAM131BQ86XD5 332 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 C1orf74Q96LT6 269 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 FEM1AQ9BSK4 669 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 PCED1AQ9H1Q7 454 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 TMPRSS4Q9NRS4 437 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 ADAM22Q9P0K1 906 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 SLC25A13Q9UJS0 675 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 VPS28Q9UK41 221 aa25.2■■□□□ 1.62
SNF8-213ENST00000514929 TEX33O43247 280 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 CNTN5O94779 1100 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 SEMA4FO95754 770 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 SYPP08247 313 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 CCDC172P0C7W6 258 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 SDC4P31431 198 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 SFSWAPQ12872 951 aaKnown RBP25.19■■□□□ 1.62
SNF8-213ENST00000514929 CDO1Q16878 200 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 BNIPLQ7Z465 357 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 MMAAQ8IVH4 418 aaKnown RBP25.19■■□□□ 1.62
SNF8-213ENST00000514929 ZCCHC9Q8N567 271 aaKnown RBP25.19■■□□□ 1.62
SNF8-213ENST00000514929 OR52K2Q8NGK3 314 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 RXFP2Q8WXD0 754 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 SNX19Q92543 992 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 ALG14Q96F25 216 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 AGPAT1Q99943 283 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 MUC3BQ9H195 1237 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 PABPC3Q9H361 631 aaKnown RBP25.19■■□□□ 1.62
SNF8-213ENST00000514929 RTN4Q9NQC3 1192 aaKnown RBP25.19■■□□□ 1.62
SNF8-213ENST00000514929 TBC1D30Q9Y2I9 924 aa25.19■■□□□ 1.62
SNF8-213ENST00000514929 A0A1B0GTW7 788 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 ARHGAP33O14559 1287 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 KCNK5O95279 499 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 RHOCP08134 193 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 ADRB1P08588 477 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 FERP16591 822 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 CST6Q15828 149 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 ALFQ53S48 1182 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 ZNF683Q8IZ20 524 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 PTPRN2Q92932 1015 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 HAPLN3Q96S86 360 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 C6orf106Q9H6K1 298 aaPredicted RBP25.18■■□□□ 1.62
SNF8-213ENST00000514929 SGK2Q9HBY8 427 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 FBXL12Q9NXK8 326 aa25.18■■□□□ 1.62
SNF8-213ENST00000514929 EIF2B4Q9UI10 523 aaKnown RBP25.18■■□□□ 1.62
SNF8-213ENST00000514929 DRGXA6NNA5 263 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 E9PAM4 449 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 SRGAP2O75044 1071 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 ENDOD1O94919 500 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 CALB1P05937 261 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 KRT3P12035 628 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 NOVA1P51513 510 aaKnown RBP25.17■■□□□ 1.62
SNF8-213ENST00000514929 PTP4A2Q12974 167 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 C15orf59Q2T9L4 293 aaPredicted RBP25.17■■□□□ 1.62
SNF8-213ENST00000514929 ACCSLQ4AC99 568 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 PSAPL1Q6NUJ1 521 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 USP30Q70CQ3 517 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 PHF13Q86YI8 300 aaPredicted RBP25.17■■□□□ 1.62
SNF8-213ENST00000514929 STK40Q8N2I9 435 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 HDDC3Q8N4P3 179 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 JOSD2Q8TAC2 188 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 SELENOOQ9BVL4 669 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 MPP6Q9NZW5 540 aa25.17■■□□□ 1.62
SNF8-213ENST00000514929 OR51B4Q9Y5P0 310 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms