RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ANO7Q6IWH7 933 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 DENND1BQ6P3S1 775 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 SLC30A9Q6PML9 568 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 HEATR4Q86WZ0 1026 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 RNFT2Q96EX2 444 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 TRIM31Q9BZY9 425 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 STN1Q9H668 368 aaKnown RBP5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 IL21RQ9HBE5 538 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 MOV10Q9HCE1 1003 aaKnown RBP5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 TMEM248Q9NWD8 314 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 ARL15Q9NXU5 204 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 C11orf21Q9P2W6 132 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 HDAC6Q9UBN7 1215 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 CD207Q9UJ71 328 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 SLC25A13Q9UJS0 675 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 HSF4Q9ULV5 492 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 GDAQ9Y2T3 454 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 AFG3L2Q9Y4W6 797 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 SMIM35A0A1B0GVV1 85 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 CGB1A6NKQ9 187 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 PPP6CO00743 305 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 SYN3O14994 580 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 TSPAN3O60637 253 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 WNT1P04628 370 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 HOXB9P17482 250 aaPredicted RBP5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 TYK2P29597 1187 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 LIFRP42702 1097 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 RHAGQ02094 409 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 SMN1Q16637 294 aaKnown RBP5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 SUPT20HL1Q3ZLR7 823 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 EARS2Q5JPH6 523 aaKnown RBP5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 WDR45BQ5MNZ6 344 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 SH2D4BQ5SQS7 431 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 LIPMQ5VYY2 423 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 MIS18BP1Q6P0N0 1132 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 BRSK2Q8IWQ3 736 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 KAT2AQ92830 837 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 SLITRK6Q9H5Y7 841 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 Q9N2J8 555 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 FLRT1Q9NZU1 646 aa5.65□□□□□ -1.5
HMGCS1-207ENST00000514610 TCRBV7S3A2A0A539 114 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 CXorf65A6NEN9 183 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 FAM90A7PA6NKC0 464 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 FAM90A22PA8MWA6 464 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 FAM90A12PA8MX19 464 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 FAM90A23PA8MXZ1 464 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 KCNJ18B7U540 433 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 MASP2O00187 686 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 TP73O15350 636 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 METTL18O95568 372 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 HNRNPA1P09651 372 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 CYP4B1P13584 511 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 TFEBP19484 476 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 ATP5F1P24539 256 aaPredicted RBP5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 ARHGAP25P42331 645 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 RPS6KA3P51812 740 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 NANOS3P60323 173 aaKnown RBP5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 VAMP2P63027 116 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 ARHGAP8P85298 464 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 HSF1Q00613 529 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 JAKMIP3Q5VZ66 844 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 PAPD7Q5XG87 772 aaKnown RBP5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 CCDC70Q6NSX1 233 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 GALNT7Q86SF2 657 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 TMEM217Q8N7C4 229 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 LSM14AQ8ND56 463 aaKnown RBP5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 KAT2BQ92831 832 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 PIMREGQ9BSJ6 248 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 SCNM1Q9BWG6 230 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 UPB1Q9UBR1 384 aa5.64□□□□□ -1.51
HMGCS1-207ENST00000514610 CYP2D7A0A087X1C5 515 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 BCAR3O75815 825 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 TNNT1P13805 278 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 CERS1P27544 350 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 GSTM2P28161 218 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 EPHB2P29323 1055 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 MAPK7Q13164 816 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 DAZAP2Q15038 168 aaPredicted RBP5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 AP5B1Q2VPB7 878 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 UBAP2Q5T6F2 1119 aaKnown RBP5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 INTS11Q5TA45 600 aaKnown RBP5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 NAPEPLDQ6IQ20 393 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 RETSATQ6NUM9 610 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 YTHDF3Q7Z739 585 aaKnown RBP5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 HVCN1Q96D96 273 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 PPM1MQ96MI6 270 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 FAM118BQ9BPY3 351 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 CLSTN3Q9BQT9 956 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 MROH8Q9H579 483 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 UBN1Q9NPG3 1134 aa5.63□□□□□ -1.51
HMGCS1-207ENST00000514610 A6NLC8 198 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 ANP32CO43423 234 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 WEE2P0C1S8 567 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 CD72P21854 359 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 HNF1BP35680 557 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 MTNR1AP48039 350 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 OAZ1P54368 228 aa5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 BYSLQ13895 437 aaKnown RBP5.62□□□□□ -1.51
HMGCS1-207ENST00000514610 C10orf76Q5T2E6 689 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms