RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PPP1R9BQ96SB3 815 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 FEM1AQ9BSK4 669 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 UVRAGQ9P2Y5 699 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 EBF1Q9UH73 591 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 ERVW-1Q9UQF0 538 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 AXIN1O15169 862 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 CREB3O43889 395 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 ALDH1A2O94788 518 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 ASLP04424 464 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 EPHX1P07099 455 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 HLA-EP13747 358 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 PRKCHP24723 683 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 PCK1P35558 622 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 NBL1P41271 181 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 ECT2LQ008S8 904 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 CA9Q16790 459 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.34□□□□□ -0.11
USP46-209ENST00000514536 SETD3Q86TU7 594 aaPredicted RBP14.34□□□□□ -0.11
USP46-209ENST00000514536 CCDC170Q8IYT3 715 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 PGBD3Q8N328 593 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 ZNF366Q8N895 744 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 HMGB4Q8WW32 186 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 TBC1D31Q96DN5 1066 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 NCAPGQ9BPX3 1015 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 SNRNP25Q9BV90 132 aaKnown RBP14.34□□□□□ -0.11
USP46-209ENST00000514536 MUC3BQ9H195 1237 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 TMEM245Q9H330 911 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 DHX35Q9H5Z1 703 aaKnown RBP14.34□□□□□ -0.11
USP46-209ENST00000514536 OSGEPQ9NPF4 335 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 BCCIPQ9P287 314 aaKnown RBP eCLIP14.34□□□□□ -0.11
USP46-209ENST00000514536 IMPACTQ9P2X3 320 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 ZNF212Q9UDV6 495 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 VPS28Q9UK41 221 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 USP18Q9UMW8 372 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 AP4E1Q9UPM8 1137 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 OR51B4Q9Y5P0 310 aa14.34□□□□□ -0.11
USP46-209ENST00000514536 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
USP46-209ENST00000514536 A0A0D9SEW6 157 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 CCDC163A0A0D9SF12 145 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 SOWAHDA6NJG2 315 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 PROB1E7EW31 1015 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 ZBTB24O43167 697 aaPredicted RBP14.33□□□□□ -0.12
USP46-209ENST00000514536 HRO43593 1189 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 SYNCRIPO60506 623 aaKnown RBP14.33□□□□□ -0.12
USP46-209ENST00000514536 LILRB5O75023 590 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 TCF4P15884 667 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 RHOQP17081 205 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 CYLC1P35663 651 aaPredicted RBP14.33□□□□□ -0.12
USP46-209ENST00000514536 MAGEA1P43355 309 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 ST8SIA6P61647 398 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 SRSF5Q13243 272 aaKnown RBP14.33□□□□□ -0.12
USP46-209ENST00000514536 STARD3Q14849 445 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 C6orf118Q5T5N4 469 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 CYP4V2Q6ZWL3 525 aaPredicted RBP14.33□□□□□ -0.12
USP46-209ENST00000514536 NLRP14Q86W24 1093 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 RASSF3Q86WH2 238 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 TMTC1Q8IUR5 882 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 NIPA2Q8N8Q9 360 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 MDGA1Q8NFP4 955 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 SLC35G2Q8TBE7 412 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 RPL10LQ96L21 214 aaKnown RBP14.33□□□□□ -0.12
USP46-209ENST00000514536 MRGPRX3Q96LB0 322 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 TPSD1Q9BZJ3 242 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 CD248Q9HCU0 757 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 SLCO3A1Q9UIG8 710 aa14.33□□□□□ -0.12
USP46-209ENST00000514536 ZFHX2Q9C0A1 2572 aaPredicted RBP14.33□□□□□ -0.12
USP46-209ENST00000514536 MYO15AQ9UKN7 3530 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 GFRA3O60609 400 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 LCA5LO95447 670 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 SRPRAP08240 638 aaKnown RBP14.32□□□□□ -0.12
USP46-209ENST00000514536 GABRG2P18507 467 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 FECHP22830 423 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 IL1R2P27930 398 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 EPHB2P29323 1055 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 SSR1P43307 286 aaKnown RBP14.32□□□□□ -0.12
USP46-209ENST00000514536 STK19P49842 368 aaPredicted RBP14.32□□□□□ -0.12
USP46-209ENST00000514536 SULT2A1Q06520 285 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 SEMA3BQ13214 749 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 BOLA3Q53S33 107 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 MYO19Q96H55 970 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 EPAS1Q99814 870 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 SPON2Q9BUD6 331 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 MTG2Q9H4K7 406 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 ZWILCHQ9H900 591 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 NDFIP2Q9NV92 336 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 TMEM248Q9NWD8 314 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 DNAI1Q9UI46 699 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 INTUQ9ULD6 942 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 NEU3Q9UQ49 428 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 INVSQ9Y283 1065 aa14.32□□□□□ -0.12
USP46-209ENST00000514536 ILVBLA1L0T0 632 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 TMEM110-MUSTN1A8MSY1 372 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 SNAP91O60641 907 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 PROSCO94903 275 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 TPI1P60174 286 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 GNA12Q03113 381 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 SPA17Q15506 151 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 SMTNL2Q2TAL5 461 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 KCNT1Q5JUK3 1230 aa14.31□□□□□ -0.12
USP46-209ENST00000514536 TXNRD3NBQ6F5E7 133 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms