RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 PDCL3Q9H2J4 239 aa12.4□□□□□ -0.42
CDK7-208ENST00000512687 FBRSQ9HAH7 460 aa12.4□□□□□ -0.42
CDK7-208ENST00000512687 NLRC4Q9NPP4 1024 aa12.4□□□□□ -0.42
CDK7-208ENST00000512687 ARHGEF38Q9NXL2 777 aa12.4□□□□□ -0.42
CDK7-208ENST00000512687 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDK7-208ENST00000512687 SUN2Q9UH99 717 aa12.4□□□□□ -0.42
CDK7-208ENST00000512687 SLCO3A1Q9UIG8 710 aa12.4□□□□□ -0.42
CDK7-208ENST00000512687 VANGL2Q9ULK5 521 aa12.4□□□□□ -0.42
CDK7-208ENST00000512687 CABIN1Q9Y6J0 2220 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 ACACBO00763 2458 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 CHD8Q9HCK8 2581 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 PLXNB3Q9ULL4 1909 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 GOLGA8SH3BPF8 625 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 ARHGAP33O14559 1287 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 GJB3O75712 270 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 CNTN5O94779 1100 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 LSM8O95777 96 aaKnown RBP12.39□□□□□ -0.43
CDK7-208ENST00000512687 SRPRAP08240 638 aaKnown RBP12.39□□□□□ -0.43
CDK7-208ENST00000512687 SLC2A3P11169 496 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 ZNF18P17022 549 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 CSRP1P21291 193 aaKnown RBP12.39□□□□□ -0.43
CDK7-208ENST00000512687 SCNN1AP37088 669 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 CXCR3P49682 368 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 ST8SIA6P61647 398 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 ECT2LQ008S8 904 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 MYL5Q02045 173 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 GFPT1Q06210 699 aaPredicted RBP12.39□□□□□ -0.43
CDK7-208ENST00000512687 ZNF252P-AS1Q0IIN9 211 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 GRIK2Q13002 908 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 SEMA3BQ13214 749 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 SYCP1Q15431 976 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 C5orf22Q49AR2 442 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 RAB6CQ53S08 254 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 WDR45BQ5MNZ6 344 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 RABGAP1LQ5R372 815 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 TTC39BQ5VTQ0 682 aaPredicted RBP12.39□□□□□ -0.43
CDK7-208ENST00000512687 ZNF776Q68DI1 518 aaPredicted RBP12.39□□□□□ -0.43
CDK7-208ENST00000512687 SASS6Q6UVJ0 657 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 BNIPLQ7Z465 357 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 PIP4P1Q86T03 277 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 ERICH1Q86X53 443 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 KDM1BQ8NB78 822 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 PTPRN2Q92932 1015 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 C18orf8Q96DM3 657 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 PGAP3Q96FM1 320 aaPredicted RBP12.39□□□□□ -0.43
CDK7-208ENST00000512687 FAM129BQ96TA1 746 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 SIK2Q9H0K1 926 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 RAB6CQ9H0N0 254 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 MIR1-1HGQ9H1L0 117 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 PABPC3Q9H361 631 aaKnown RBP12.39□□□□□ -0.43
CDK7-208ENST00000512687 ANO10Q9NW15 660 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 TMEM63CQ9P1W3 806 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 LIMA1Q9UHB6 759 aaKnown RBP12.39□□□□□ -0.43
CDK7-208ENST00000512687 SLC12A6Q9UHW9 1150 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 EIF2B4Q9UI10 523 aaKnown RBP12.39□□□□□ -0.43
CDK7-208ENST00000512687 TMEM59LQ9UK28 342 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 OR51B4Q9Y5P0 310 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 ANKRD36A6QL64 1941 aa12.39□□□□□ -0.43
CDK7-208ENST00000512687 A0A1B0GTW7 788 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 LGALS16A8MUM7 142 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 MID1O15344 667 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 MOCS3O95396 460 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 GJB6O95452 261 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 SEMA4FO95754 770 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 DNTTP04053 509 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 CYP1A1P04798 512 aaPredicted RBP12.38□□□□□ -0.43
CDK7-208ENST00000512687 CD59P13987 128 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 SOX5P35711 763 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 PLK1P53350 603 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 METAP1P53582 386 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 SNX16P57768 344 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 ZBTB16Q05516 673 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 CST6Q15828 149 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 ALFQ53S48 1182 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 BRMS1LQ5PSV4 323 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 CCDC183Q5T5S1 534 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 PHLDB2Q86SQ0 1253 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 CCDC117Q8IWD4 279 aaPredicted RBP12.38□□□□□ -0.43
CDK7-208ENST00000512687 STK40Q8N2I9 435 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 AOPEPQ8N6M6 819 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 FRS2Q8WU20 508 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 SNX19Q92543 992 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 CFAP57Q96MR6 1250 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 ORAI3Q9BRQ5 295 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 TKTL2Q9H0I9 626 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 METTL5Q9NRN9 209 aaKnown RBP12.38□□□□□ -0.43
CDK7-208ENST00000512687 DNAAF2Q9NVR5 837 aaKnown RBP12.38□□□□□ -0.43
CDK7-208ENST00000512687 RRN3Q9NYV6 651 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 SUSD2Q9UGT4 822 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 STAP1Q9ULZ2 295 aa12.38□□□□□ -0.43
CDK7-208ENST00000512687 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.38□□□□□ -0.43
CDK7-208ENST00000512687 KMT2BQ9UMN6 2715 aaPredicted RBP12.38□□□□□ -0.43
CDK7-208ENST00000512687 TDRD6O60522 2096 aaKnown RBP12.38□□□□□ -0.43
CDK7-208ENST00000512687 LRRK1Q38SD2 2015 aa12.37□□□□□ -0.43
CDK7-208ENST00000512687 FRYQ5TBA9 3013 aa12.37□□□□□ -0.43
CDK7-208ENST00000512687 EDDM13A0A1B0GTR0 161 aa12.37□□□□□ -0.43
CDK7-208ENST00000512687 A0A1W2PP55 124 aa12.37□□□□□ -0.43
CDK7-208ENST00000512687 BCAT2O15382 392 aaPredicted RBP12.37□□□□□ -0.43
CDK7-208ENST00000512687 OPHN1O60890 802 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms