RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 EIF2B4Q9UI10 523 aaKnown RBP23.67■■□□□ 1.38
SNF8-209ENST00000510558 OPHN1O60890 802 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 RNASEH1O60930 286 aaKnown RBP23.66■■□□□ 1.38
SNF8-209ENST00000510558 SEMA4FO95754 770 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 CEACAM1P13688 526 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 PMLP29590 882 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 CDR2Q01850 454 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 SULT2A1Q06520 285 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 DEFB124Q8NES8 71 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 SNX19Q92543 992 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 PCMTD1Q96MG8 357 aaPredicted RBP23.66■■□□□ 1.38
SNF8-209ENST00000510558 PABPC3Q9H361 631 aaKnown RBP23.66■■□□□ 1.38
SNF8-209ENST00000510558 ANLNQ9NQW6 1124 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 SCML1Q9UN30 329 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 PAXBP1Q9Y5B6 917 aa23.66■■□□□ 1.38
SNF8-209ENST00000510558 PCNX2A6NKB5 2137 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.65■■□□□ 1.38
SNF8-209ENST00000510558 I6L893 689 aaPredicted RBP23.65■■□□□ 1.38
SNF8-209ENST00000510558 BCAT2O15382 392 aaPredicted RBP23.65■■□□□ 1.38
SNF8-209ENST00000510558 ZNF18P17022 549 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 CHRNB2P17787 502 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 NNMTP40261 264 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 STAT1P42224 750 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 FMO1Q01740 532 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 GRIK2Q13002 908 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 SEMA3BQ13214 749 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 ZNF177Q13360 481 aaPredicted RBP23.65■■□□□ 1.38
SNF8-209ENST00000510558 NCAPHQ15003 741 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 CST6Q15828 149 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 C5orf22Q49AR2 442 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 TRNP1Q6NT89 227 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 USP30Q70CQ3 517 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 NEK11Q8NG66 645 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 OR52K2Q8NGK3 314 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 CNTNAP3BQ96NU0 1288 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 PPP1R9BQ96SB3 815 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 CNTNAP3Q9BZ76 1288 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 SGK2Q9HBY8 427 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 DNAAF2Q9NVR5 837 aaKnown RBP23.65■■□□□ 1.38
SNF8-209ENST00000510558 TMEM59LQ9UK28 342 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 NCKAP1Q9Y2A7 1128 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 TPRP12270 2363 aaKnown RBP23.65■■□□□ 1.38
SNF8-209ENST00000510558 DOCK4Q8N1I0 1966 aa23.65■■□□□ 1.38
SNF8-209ENST00000510558 MID1O15344 667 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 CLDN11O75508 207 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 CYP1A1P04798 512 aaPredicted RBP23.64■■□□□ 1.37
SNF8-209ENST00000510558 CDK11BP21127 795 aaKnown RBP23.64■■□□□ 1.37
SNF8-209ENST00000510558 TYRO3Q06418 890 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 ZNF252P-AS1Q0IIN9 211 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 MMAAQ8IVH4 418 aaKnown RBP23.64■■□□□ 1.37
SNF8-209ENST00000510558 GANCQ8TET4 914 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 PTPRN2Q92932 1015 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 ALG14Q96F25 216 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 ZDHHC5Q9C0B5 715 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 HSD3B7Q9H2F3 369 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 SLC32A1Q9H598 525 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 TMEM51Q9NW97 253 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 FBXL12Q9NXK8 326 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.64■■□□□ 1.37
SNF8-209ENST00000510558 SNX10Q9Y5X0 201 aa23.64■■□□□ 1.37
SNF8-209ENST00000510558 UPK3BL1B0FP48 263 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 UPK3BL2E5RIL1 263 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 CDH4P55283 916 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 UBXN1Q04323 297 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 ARCQ7LC44 396 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 PIP4P1Q86T03 277 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 STK40Q8N2I9 435 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 AOPEPQ8N6M6 819 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 C1orf216Q8TAB5 229 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 CFAP57Q96MR6 1250 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 ERGIC2Q96RQ1 377 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 FAM129BQ96TA1 746 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 FEM1AQ9BSK4 669 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 METTL5Q9NRN9 209 aaKnown RBP23.63■■□□□ 1.37
SNF8-209ENST00000510558 TMPRSS4Q9NRS4 437 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 TMEM63CQ9P1W3 806 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 SERGEFQ9UGK8 458 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 ANGPTL2Q9UKU9 493 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 TBC1D30Q9Y2I9 924 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 OR51B4Q9Y5P0 310 aa23.63■■□□□ 1.37
SNF8-209ENST00000510558 A0A1W2PP55 124 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 LRRC10BA6NIK2 292 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 CNTN5O94779 1100 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 VAV1P15498 845 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 MMP8P22894 467 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 RDXP35241 583 aaKnown RBP23.62■■□□□ 1.37
SNF8-209ENST00000510558 SFSWAPQ12872 951 aaKnown RBP23.62■■□□□ 1.37
SNF8-209ENST00000510558 ALFQ53S48 1182 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 TRIM72Q6ZMU5 477 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 APTXQ7Z2E3 356 aaKnown RBP23.62■■□□□ 1.37
SNF8-209ENST00000510558 BNIPLQ7Z465 357 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 ZNF683Q8IZ20 524 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 SLC30A5Q8TAD4 765 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 FRS2Q8WU20 508 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 BIRC7Q96CA5 298 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 C11orf70Q9BRQ4 267 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 SLC25A13Q9UJS0 675 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 VPS28Q9UK41 221 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 SLCO1B1Q9Y6L6 691 aa23.62■■□□□ 1.37
SNF8-209ENST00000510558 GJB3O75712 270 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms