RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 SPON1Q9HCB6 807 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ATP13A1Q9HD20 1204 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ACTL7BQ9Y614 415 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 F8VP50 259 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 BTN3A1O00481 513 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 CHADO15335 359 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ZSCAN5DPP0CG00 497 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 SHMT1P34896 483 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 FLT3P36888 993 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ADARP55265 1226 aaKnown RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 ITGA1P56199 1179 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ITGB3BPQ13352 177 aaPredicted RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 PARP6Q2NL67 630 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 RNF43Q68DV7 783 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ZNF57Q68EA5 555 aaPredicted RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 C16orf46Q6P387 395 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 SLC30A10Q6XR72 485 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 NET1Q7Z628 596 aaPredicted RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 ENKURQ8TC29 256 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 SERAC1Q96JX3 654 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 GRIP2Q9C0E4 1043 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 NOL6Q9H6R4 1146 aaKnown RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 TRIM43BA6NCK2 446 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 H3BN98 237 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ACKR2O00590 384 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 UNC5CO95185 931 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ZNF286BP0CG31 522 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 TAL1P17542 331 aaPredicted RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 PLK1P53350 603 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 CDH8P55286 799 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 SREBF2Q12772 1141 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 GLT6D1Q7Z4J2 308 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ZNF605Q86T29 641 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 KRT73Q86Y46 540 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 SYTL1Q8IYJ3 562 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 PIWIL2Q8TC59 973 aaKnown RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 TRIM63Q969Q1 353 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 NACC2Q96BF6 587 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ATAD3AQ9NVI7 634 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ZMYM5Q9UJ78 669 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ANAPC2Q9UJX6 822 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 PCDHB5Q9Y5E4 795 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 CAMSAP1Q5T5Y3 1602 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 LACTBL1A8MY62 500 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 MYL12BO14950 172 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 MYL12AP19105 171 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 GRK4P32298 578 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 ELAVL2Q12926 359 aaKnown RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 AUHQ13825 339 aaKnown RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 SLC27A1Q6PCB7 646 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 NT5DC4Q86YG4 428 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 MCOLN3Q8TDD5 553 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 HGH1Q9BTY7 390 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 CLEC4MQ9H2X3 399 aaPredicted RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 ATXN3LQ9H3M9 355 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 OSGEPL1Q9H4B0 414 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 PRDM16Q9HAZ2 1276 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 MAN1C1Q9NR34 630 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 AP3M1Q9Y2T2 418 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 SALL1Q9NSC2 1324 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 RBAK-RBAKDNI3L0D1 243 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 PSMD12O00232 456 aaPredicted RBP10.77□□□□□ -0.68
NEK1-206ENST00000510533 NKRFO15226 690 aaKnown RBP eCLIP10.77□□□□□ -0.68
NEK1-206ENST00000510533 CELF2O95319 508 aaKnown RBP10.77□□□□□ -0.68
NEK1-206ENST00000510533 SHBGP04278 402 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 CNPP09543 421 aaKnown RBP10.77□□□□□ -0.68
NEK1-206ENST00000510533 PAICSP22234 425 aaKnown RBP10.77□□□□□ -0.68
NEK1-206ENST00000510533 S100A3P33764 101 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 GRIK4Q16099 956 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 LY6KQ17RY6 165 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 ATAD3BQ5T9A4 648 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 B3GNT6Q6ZMB0 384 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 CAMK1DQ8IU85 385 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 PCDH20Q8N6Y1 951 aaKnown RBP10.77□□□□□ -0.68
NEK1-206ENST00000510533 SLC2A14Q8TDB8 520 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 AGAP11Q8TF27 550 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 CIPCQ9C0C6 399 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 ARHGEF3Q9NR81 526 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 SETD4Q9NVD3 440 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 CEP152O94986 1710 aa10.77□□□□□ -0.68
NEK1-206ENST00000510533 ASTN2O75129 1339 aaPredicted RBP10.77□□□□□ -0.68
NEK1-206ENST00000510533 E5RJQ4 531 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 PDE2AO00408 941 aaPredicted RBP10.77□□□□□ -0.69
NEK1-206ENST00000510533 ERVK-10P10266 1014 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 NOS3P29474 1203 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 IL12RB1P42701 662 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 PIK3CGP48736 1102 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 ZNF135P52742 658 aaPredicted RBP10.77□□□□□ -0.69
NEK1-206ENST00000510533 MAPK10P53779 464 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 FGD3Q5JSP0 725 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 AADACL2Q6P093 401 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 TRMT11Q7Z4G4 463 aaKnown RBP10.77□□□□□ -0.69
NEK1-206ENST00000510533 MREGQ8N565 214 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 ADAM32Q8TC27 787 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 REPS1Q96D71 796 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 HMG20AQ9NP66 347 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 ENTPD7Q9NQZ7 604 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 ARHGAP28Q9P2N2 729 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 PCYOX1Q9UHG3 505 aa10.77□□□□□ -0.69
NEK1-206ENST00000510533 ATP6V1HQ9UI12 483 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms