RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 GPRIN1Q7Z2K8 1008 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 TEX9Q8N6V9 391 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 HASPINQ8TF76 798 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 SOCS4Q8WXH5 440 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 PANX3Q96QZ0 392 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 CCDC106Q9BWC9 280 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 OR12D3Q9UGF7 316 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 FBXW11Q9UKB1 542 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 PTCH2Q9Y6C5 1203 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 ZNF638Q14966 1978 aaKnown RBP11.22□□□□□ -0.61
SEC31A-228ENST00000509142 E2F8A0AVK6 867 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 KPNA6O60684 536 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 GLRA3O75311 464 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 BDNFP23560 247 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 AIF1P55008 147 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 AQP5P55064 265 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 RPL10AP62906 217 aaKnown RBP11.22□□□□□ -0.61
SEC31A-228ENST00000509142 OLIG2Q13516 323 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 KYAT3Q6YP21 454 aaKnown RBP11.22□□□□□ -0.61
SEC31A-228ENST00000509142 C7orf26Q96N11 449 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 APOL2Q9BQE5 337 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 RHOBTB2Q9BYZ6 727 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 LRRC40Q9H9A6 602 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 KCNK4Q9NYG8 393 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 IGSF9Q9P2J2 1179 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 VANGL2Q9ULK5 521 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 B2RBV5 119 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 DCLK1O15075 740 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 MTSS1O43312 755 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 DUSP11O75319 330 aaKnown RBP11.22□□□□□ -0.61
SEC31A-228ENST00000509142 LYPLA1O75608 230 aaPredicted RBP11.22□□□□□ -0.61
SEC31A-228ENST00000509142 F7P08709 466 aaPredicted RBP11.22□□□□□ -0.61
SEC31A-228ENST00000509142 ODC1P11926 461 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 THPOP40225 353 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 ITPRIPL1Q6GPH6 555 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 OR52E8Q6IFG1 317 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 LRRC74BQ6ZQY2 392 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 CYS1Q717R9 158 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 WDR75Q8IWA0 830 aaKnown RBP11.22□□□□□ -0.61
SEC31A-228ENST00000509142 ZNF483Q8TF39 744 aaPredicted RBP11.22□□□□□ -0.61
SEC31A-228ENST00000509142 MYLPFQ96A32 169 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 NTAN1Q96AB6 310 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 IFT43Q96FT9 208 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 RRN3Q9NYV6 651 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 GIT1Q9Y2X7 761 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 SNX10Q9Y5X0 201 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 RALGAPA2Q2PPJ7 1873 aa11.22□□□□□ -0.61
SEC31A-228ENST00000509142 SF3B1O75533 1304 aaKnown RBP eCLIP11.21□□□□□ -0.614e-7■■□□□ 12.1
SEC31A-228ENST00000509142 ENO4A6NNW6 628 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 PRR5-ARHGAP8B1AHC4 643 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 ZNF189O75820 626 aaPredicted RBP11.21□□□□□ -0.61
SEC31A-228ENST00000509142 FYNP06241 537 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 ITGA2BP08514 1039 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 CD1EP15812 388 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 PTPN3P26045 913 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 VHLP40337 213 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 MXRA7P84157 204 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 ARHGAP8P85298 464 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 SLC34A1Q06495 639 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 PRPSAP1Q14558 356 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 TIGD5Q53EQ6 642 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 STEAP4Q687X5 459 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 RNF111Q6ZNA4 994 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 MAVSQ7Z434 540 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 ACMSDQ8TDX5 336 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 PPP4R1Q8TF05 950 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 CERS2Q96G23 380 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 CELF6Q96J87 481 aaKnown RBP11.21□□□□□ -0.61
SEC31A-228ENST00000509142 PAAF1Q9BRP4 392 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 CHST12Q9NRB3 414 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 DCDC2Q9UHG0 476 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 NOD1Q9Y239 953 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 BIRC5O15392 142 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 JCHAINP01591 159 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 KCNA4P22459 653 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 RPL9P32969 192 aaKnown RBP11.21□□□□□ -0.61
SEC31A-228ENST00000509142 GP5P40197 560 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 CACNA2D1P54289 1103 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 KDSRQ06136 332 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 SPANXN3Q5MJ09 141 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 GDF6Q6KF10 455 aaPredicted RBP11.21□□□□□ -0.61
SEC31A-228ENST00000509142 TIFABQ6ZNK6 161 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 GSTCDQ8NEC7 633 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 ZMIZ2Q8NF64 920 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 USP33Q8TEY7 942 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 ARNTL2Q8WYA1 636 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 ZFYVE28Q9HCC9 887 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 WDR6Q9NNW5 1121 aaKnown RBP11.21□□□□□ -0.61
SEC31A-228ENST00000509142 THAP1Q9NVV9 213 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 MKS1Q9NXB0 559 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 UBP1Q9NZI7 540 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 STX18Q9P2W9 335 aaKnown RBP11.21□□□□□ -0.61
SEC31A-228ENST00000509142 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 PSAT1Q9Y617 370 aa11.21□□□□□ -0.61
SEC31A-228ENST00000509142 ARHGAP42A6NI28 874 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 ZBTB24O43167 697 aaPredicted RBP11.21□□□□□ -0.62
SEC31A-228ENST00000509142 ALDH1A2O94788 518 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 LUC7L3O95232 432 aaKnown RBP11.21□□□□□ -0.62
SEC31A-228ENST00000509142 CPOXP36551 454 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 PGM1P36871 562 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms