RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 LSM8O95777 96 aaKnown RBP22.74■■□□□ 1.23
PACRGL-220ENST00000508952 CXCR3P49682 368 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 NOMO3P69849 1222 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 BNC1Q01954 994 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 CST6Q15828 149 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 NAA35Q5VZE5 725 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 STK40Q8N2I9 435 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 NT5C3BQ969T7 300 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 FAM129BQ96TA1 746 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 TKTL2Q9H0I9 626 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 SGK2Q9HBY8 427 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 NLRC4Q9NPP4 1024 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 FBXL12Q9NXK8 326 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 RRN3Q9NYV6 651 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 NCKAP1Q9Y2A7 1128 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 SNX10Q9Y5X0 201 aa22.74■■□□□ 1.23
PACRGL-220ENST00000508952 A0A1W2PP55 124 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 TARSL2A2RTX5 802 aaKnown RBP22.73■■□□□ 1.23
PACRGL-220ENST00000508952 TOP3BO95985 862 aaKnown RBP22.73■■□□□ 1.23
PACRGL-220ENST00000508952 TPM2P07951 284 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 VAV1P15498 845 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 FLT3P36888 993 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 PSMD8P48556 350 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 PLK1P53350 603 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 POLR2FP61218 127 aaKnown RBP22.73■■□□□ 1.23
PACRGL-220ENST00000508952 SASS6Q6UVJ0 657 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 USP30Q70CQ3 517 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 PTPRN2Q92932 1015 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 BIRC7Q96CA5 298 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 ZDHHC5Q9C0B5 715 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 WDCPQ9H6R7 721 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 IL21RQ9HBE5 538 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 TMPRSS4Q9NRS4 437 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 ARHGEF38Q9NXL2 777 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 NOCTQ9UK39 431 aaKnown RBP22.73■■□□□ 1.23
PACRGL-220ENST00000508952 SCML1Q9UN30 329 aa22.73■■□□□ 1.23
PACRGL-220ENST00000508952 KMT2BQ9UMN6 2715 aaPredicted RBP22.73■■□□□ 1.23
PACRGL-220ENST00000508952 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.72■■□□□ 1.23
PACRGL-220ENST00000508952 FAM47DPA6NHR8 397 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 CNTN5O94779 1100 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 SPINK2P20155 84 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 SCNN1AP37088 669 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 CSNK1EP49674 416 aaKnown RBP22.72■■□□□ 1.23
PACRGL-220ENST00000508952 COPB1P53618 953 aaKnown RBP22.72■■□□□ 1.23
PACRGL-220ENST00000508952 FAM193AP78312 1265 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 SIM1P81133 766 aaPredicted RBP22.72■■□□□ 1.23
PACRGL-220ENST00000508952 DEUP1Q05D60 604 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 SULT2A1Q06520 285 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 MTA1Q13330 715 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 ZNF177Q13360 481 aaPredicted RBP22.72■■□□□ 1.23
PACRGL-220ENST00000508952 SLC25A52Q3SY17 297 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 BRMS1LQ5PSV4 323 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 FKBP15Q5T1M5 1219 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 TRNP1Q6NT89 227 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 SND1Q7KZF4 910 aaKnown RBP eCLIP22.72■■□□□ 1.23
PACRGL-220ENST00000508952 ALG14Q96F25 216 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 PGAP3Q96FM1 320 aaPredicted RBP22.72■■□□□ 1.23
PACRGL-220ENST00000508952 CAMK1GQ96NX5 476 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 FEM1AQ9BSK4 669 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 ANO10Q9NW15 660 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 SIK3Q9Y2K2 1263 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 PLXNA2O75051 1894 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 TMEM131Q92545 1883 aa22.72■■□□□ 1.23
PACRGL-220ENST00000508952 A0A1B0GVT2 93 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 GOLGA6L22H0YM25 854 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 SH3BP5O60239 455 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 CLDN11O75508 207 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 RNASEH2AO75792 299 aaKnown RBP22.71■■□□□ 1.23
PACRGL-220ENST00000508952 CHRNB2P17787 502 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 SLC8A1P32418 973 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 SOX5P35711 763 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 NNMTP40261 264 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 OXCT1P55809 520 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 JAM2P57087 298 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 STX1AQ16623 288 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 C5orf22Q49AR2 442 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 MSANTD4Q8NCY6 345 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 OMDQ99983 421 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 NEUROG2Q9H2A3 272 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 GAREM1Q9H706 876 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 TM9SF3Q9HD45 589 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 TMEM59LQ9UK28 342 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 KNL1Q8NG31 2342 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 AKAP13Q12802 2813 aa22.71■■□□□ 1.23
PACRGL-220ENST00000508952 USP24Q9UPU5 2620 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 IGHV4-34P06331 123 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 AFF3P51826 1226 aaKnown RBP22.7■■□□□ 1.22
PACRGL-220ENST00000508952 GALCP54803 685 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 CDH4P55283 916 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 FMO1Q01740 532 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 MYL5Q02045 173 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 SLC14A1Q13336 389 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 SYCP1Q15431 976 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 ALFQ53S48 1182 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 NCEH1Q6PIU2 408 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 LAYNQ6UX15 382 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 PHLDB2Q86SQ0 1253 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 ZNF677Q86XU0 584 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 ZNF683Q8IZ20 524 aa22.7■■□□□ 1.22
PACRGL-220ENST00000508952 AADATQ8N5Z0 425 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms