RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 TNFSF13BQ9Y275 285 aa7.8□□□□□ -1.16
CHD1-205ENST00000508756 DTX4Q9Y2E6 619 aa7.8□□□□□ -1.16
CHD1-205ENST00000508756 NPIPB13A6NJU9 1138 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 NPIPB5A8MRT5 1133 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 NPIPB4C9JG80 1138 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 PRPF4O43172 522 aaKnown RBP eCLIP7.79□□□□□ -1.16
CHD1-205ENST00000508756 MSI1O43347 362 aaKnown RBP7.79□□□□□ -1.16
CHD1-205ENST00000508756 HNRNPRO43390 633 aaKnown RBP7.79□□□□□ -1.16
CHD1-205ENST00000508756 CHN1P15882 459 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 HALP42357 657 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 RBM5P52756 815 aaKnown RBP eCLIP7.79□□□□□ -1.16
CHD1-205ENST00000508756 ZBTB16Q05516 673 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 GALNT3Q14435 633 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 DLGAP5Q15398 846 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 GPR162Q16538 588 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 SLC30A9Q6PML9 568 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 B4GALNT4Q76KP1 1039 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 RNF144BQ7Z419 303 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 VPS52Q8N1B4 723 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 TBC1D20Q96BZ9 403 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 HERC2P3Q9BVR0 1158 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 TMLHEQ9NVH6 421 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 KIF17Q9P2E2 1029 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 SLC25A13Q9UJS0 675 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 HS3ST3B1Q9Y662 390 aa7.79□□□□□ -1.16
CHD1-205ENST00000508756 ZNF335Q9H4Z2 1342 aaPredicted RBP7.78□□□□□ -1.16
CHD1-205ENST00000508756 KCNJ18B7U540 433 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 B9A039 149 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 DHRS4L1P0CG22 281 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 ACP5P13686 325 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 ME1P48163 572 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 ISM2Q6H9L7 571 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 KLBQ86Z14 1044 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 PTGR2Q8N8N7 351 aaPredicted RBP7.78□□□□□ -1.16
CHD1-205ENST00000508756 FSIP1Q8NA03 581 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 SPATA5Q8NB90 893 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 AFG1LQ8WV93 481 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 HMCESQ96FZ2 354 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 FRMD8Q9BZ67 464 aaPredicted RBP7.78□□□□□ -1.16
CHD1-205ENST00000508756 RMI1Q9H9A7 625 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 CHODLQ9H9P2 273 aa7.78□□□□□ -1.16
CHD1-205ENST00000508756 TCRBV7S3A2A0A539 114 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 A6NNC1 897 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 NEURL1O76050 574 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 TFRCP02786 760 aaKnown RBP7.77□□□□□ -1.17
CHD1-205ENST00000508756 TMEM191BP0C7N4 346 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 AARSP49588 968 aaKnown RBP eCLIP7.77□□□□□ -1.17
CHD1-205ENST00000508756 RHAGQ02094 409 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 PIK3CD-AS1Q5SR53 167 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 C6orf10Q5SRN2 563 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 TTLL5Q6EMB2 1281 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 MTFR2Q6P444 385 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 IRF2BP2Q7Z5L9 587 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 TMEM217Q8N7C4 229 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 KTI12Q96EK9 354 aaPredicted RBP7.77□□□□□ -1.17
CHD1-205ENST00000508756 TRIM31Q9BZY9 425 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 TWSG1Q9GZX9 223 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 SPAG4Q9NPE6 437 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 SEMA4BQ9NPR2 832 aaPredicted RBP7.77□□□□□ -1.17
CHD1-205ENST00000508756 ITM2CQ9NQX7 267 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 SLC22A11Q9NSA0 550 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 ZBTB40Q9NUA8 1239 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 FEM1BQ9UK73 627 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 PCDHA12Q9UN75 941 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 PCDHGB3Q9Y5G1 929 aa7.77□□□□□ -1.17
CHD1-205ENST00000508756 FOXO6A8MYZ6 492 aa7.76□□□□□ -1.17
CHD1-205ENST00000508756 CSF1P09603 554 aa7.76□□□□□ -1.17
CHD1-205ENST00000508756 PKMP14618 531 aaKnown RBP7.76□□□□□ -1.17
CHD1-205ENST00000508756 HOXB9P17482 250 aaPredicted RBP7.76□□□□□ -1.17
CHD1-205ENST00000508756 TNFRSF1BP20333 461 aa7.76□□□□□ -1.17
CHD1-205ENST00000508756 ALKBH1Q13686 389 aaKnown RBP7.76□□□□□ -1.17
CHD1-205ENST00000508756 INPP5JQ15735 1006 aaPredicted RBP7.76□□□□□ -1.17
CHD1-205ENST00000508756 ZNF484Q5JVG2 852 aa7.76□□□□□ -1.17
CHD1-205ENST00000508756 ASPHD1Q5U4P2 390 aa7.76□□□□□ -1.17
CHD1-205ENST00000508756 SCN4BQ8IWT1 228 aa7.76□□□□□ -1.17
CHD1-205ENST00000508756 MMP21Q8N119 569 aa7.76□□□□□ -1.17
CHD1-205ENST00000508756 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
CHD1-205ENST00000508756 CLMNQ96JQ2 1002 aa7.76□□□□□ -1.17
CHD1-205ENST00000508756 ZNF304Q9HCX3 659 aa7.76□□□□□ -1.17
CHD1-205ENST00000508756 ATG13O75143 517 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 NDUFB8O95169 186 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 CHRNB1P11230 501 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 TYK2P29597 1187 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 AVPR2P30518 371 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 GAD2Q05329 585 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 PMPCAQ10713 525 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 GXYLT1Q4G148 440 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 HMBOX1Q6NT76 420 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 LDHAL6AQ6ZMR3 332 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 FTSJ3Q8IY81 847 aaKnown RBP7.75□□□□□ -1.17
CHD1-205ENST00000508756 LINS1Q8NG48 757 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 C2CD4CQ8TF44 421 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 ZNF419Q96HQ0 510 aaPredicted RBP7.75□□□□□ -1.17
CHD1-205ENST00000508756 WDR83Q9BRX9 315 aaKnown RBP7.75□□□□□ -1.17
CHD1-205ENST00000508756 HERPUD2Q9BSE4 406 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 ACAD9Q9H845 621 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 POT1Q9NUX5 634 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 TMEM248Q9NWD8 314 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 KLQ9UEF7 1012 aa7.75□□□□□ -1.17
CHD1-205ENST00000508756 TMEM272A0A1B0GTI8 110 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms