RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 RAD54BQ9Y620 910 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 TCRBV7S2A1N4TA0A589 114 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 ILVBLA1L0T0 632 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 RASA4BC9J798 803 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 NCAM2O15394 837 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 RASA4O43374 803 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 MFSD11O43934 449 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 MAP3K6O95382 1288 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 HOXD9P28356 352 aaPredicted RBP11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 YBEYP58557 167 aaPredicted RBP11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 OTUD4Q01804 1114 aaKnown RBP11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 PFKPQ01813 784 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 GNA12Q03113 381 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 GBE1Q04446 702 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 SNX1Q13596 522 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 PAFAH1B3Q15102 231 aaKnown RBP11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 PARP15Q460N3 678 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 FYB2Q5VWT5 728 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 GRAMD4Q6IC98 578 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 NUDT18Q6ZVK8 323 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 GSTA5Q7RTV2 222 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 ANKS1BQ7Z6G8 1248 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 ZC3H18Q86VM9 953 aaKnown RBP11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 NLRP14Q86W24 1093 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 CREG2Q8IUH2 290 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 CDKL3Q8IVW4 592 aaPredicted RBP11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 UMODL1-AS1Q8N2C9 162 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 SLC44A3Q8N4M1 653 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 CCDC33Q8N5R6 958 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 CEP112Q8N8E3 955 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 ACTL9Q8TC94 416 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 C1orf54Q8WWF1 131 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 MAGOHBQ96A72 148 aaKnown RBP11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 CCDC114Q96M63 670 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 FAM118BQ9BPY3 351 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 SLC2A11Q9BYW1 496 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 MAGEH1Q9H213 219 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 SP110Q9HB58 689 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 ABCB8Q9NUT2 735 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 MARK1Q9P0L2 795 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 SEPT10Q9P0V9 454 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 DEC1Q9P2X7 70 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 SAE1Q9UBE0 346 aaPredicted RBP11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 VPS28Q9UK41 221 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 ZNF148Q9UQR1 794 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 MFHAS1Q9Y4C4 1052 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 MRFAP1Q9Y605 127 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 DENND4AQ7Z401 1863 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 DOCK8Q8NF50 2099 aa11.31□□□□□ -0.6
BRCC3P1-201ENST00000508559 CTAGE15A4D2H0 777 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 HOXC11O43248 304 aaPredicted RBP11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 ZNF189O75820 626 aaPredicted RBP11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 STK10O94804 968 aaKnown RBP11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 PENKP01210 267 aaPredicted RBP11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 CTAGE8P0CG41 777 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 PECAM1P16284 738 aaPredicted RBP11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 DGKGP49619 791 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 PAPOLAP51003 745 aaKnown RBP11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 KDSRQ06136 332 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 ADCY2Q08462 1091 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 AP1B1Q10567 949 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 TDGQ13569 410 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 CCDC70Q6NSX1 233 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 ZNF783Q6ZMS7 281 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 CTAGE6Q86UF2 777 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 LRRC49Q8IUZ0 686 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 CTAGE4Q8IX94 777 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 CCDC105Q8IYK2 499 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 NETO2Q8NC67 525 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 FIBINQ8TAL6 211 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 TFB1MQ8WVM0 346 aaKnown RBP11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 ATXN2LQ8WWM7 1075 aaKnown RBP11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 ATG4AQ8WYN0 398 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 HMCESQ96FZ2 354 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 HERPUD2Q9BSE4 406 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 C2orf49Q9BVC5 232 aaPredicted RBP11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 SLC39A8Q9C0K1 460 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 BRD8Q9H0E9 1235 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 ATP13A1Q9HD20 1204 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 HPS4Q9NQG7 708 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 GTSE1Q9NYZ3 720 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 DTLQ9NZJ0 730 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 NEU3Q9UQ49 428 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 TBC1D30Q9Y2I9 924 aa11.3□□□□□ -0.6
BRCC3P1-201ENST00000508559 HACD1B0YJ81 288 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 LOC730098B7Z3J9 87 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 CCDC188H7C350 402 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 CBX4O00257 560 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 GFRA2O00451 464 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 CACNG3O60359 315 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 RBP3P10745 1247 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 POLR2EP19388 210 aaKnown RBP11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 ACTN2P35609 894 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 CSKP41240 450 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 NUMBP49757 651 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 LMNB2Q03252 620 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 LMAN2Q12907 356 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 KLF1Q13351 362 aaPredicted RBP11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 SLC12A1Q13621 1099 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms