RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 SNX19Q92543 992 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 PTPRN2Q92932 1015 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 CCDC34Q96HJ3 373 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 SRRTQ9BXP5 876 aaKnown RBP6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 GTPBP4Q9BZE4 634 aaKnown RBP6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 BTBD1Q9H0C5 482 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 NEUROG2Q9H2A3 272 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 FBRSQ9HAH7 460 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 SGK2Q9HBY8 427 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 KIAA1522Q9P206 1035 aaPredicted RBP6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 SUN2Q9UH99 717 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 ADAMTS1Q9UHI8 967 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 AJAP1Q9UKB5 411 aaPredicted RBP6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 CTNND2Q9UQB3 1225 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 ERVW-1Q9UQF0 538 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 ITIH6Q6UXX5 1313 aa6.66□□□□□ -1.34
HMGN1P16-201ENST00000508308 HELZ2Q9BYK8 2649 aaKnown RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 ATMQ13315 3056 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 A0A1W2PP55 124 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 A0A1W2PR77 199 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 GOLGA6L4A6NEF3 574 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 I6L893 689 aaPredicted RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 LETM1O95202 739 aaPredicted RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 LUC7L3O95232 432 aaKnown RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 CER1O95813 267 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 TRUB2O95900 331 aaKnown RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 MOCS2O96007 188 aaPredicted RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 AFPP02771 609 aaKnown RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 DNTTP04053 509 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 ASLP04424 464 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 VAV1P15498 845 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 TACR2P21452 398 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 MZF1P28698 734 aaPredicted RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 DRD3P35462 400 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 YWHAZP63104 245 aaKnown RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 NUCB2P80303 420 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 IL9RQ01113 521 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 PDCLQ13371 301 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 STIM1Q13586 685 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 MEA1Q16626 185 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 OTUD1Q5VV17 481 aaPredicted RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 RAP1GAP2Q684P5 730 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 KIAA0895LQ68EN5 471 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 CXorf57Q6NSI4 855 aaKnown RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 NCEH1Q6PIU2 408 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 IL27RAQ6UWB1 636 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 TMPRSS7Q7RTY8 843 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 CIR1Q86X95 450 aaPredicted RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 LGI2Q8N0V4 545 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 STK40Q8N2I9 435 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 KDM1BQ8NB78 822 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 MDM1Q8TC05 714 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 RHBDD1Q8TEB9 315 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 FRS2Q8WU20 508 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 GOLGA1Q92805 767 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 IGSF8Q969P0 613 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 FAM131CQ96AQ9 280 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 RNF25Q96BH1 459 aaPredicted RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 FAM149B1Q96BN6 582 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 ALG14Q96F25 216 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 RPL10LQ96L21 214 aaKnown RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 SLC6A18Q96N87 628 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 SERPINB11Q96P15 392 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 SLC2A13Q96QE2 648 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 CPXM1Q96SM3 734 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 CRACR2AQ9BSW2 395 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 SIX2Q9NPC8 291 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 UBE2TQ9NPD8 197 aaPredicted RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 ANLNQ9NQW6 1124 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 ST7Q9NRC1 585 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 FBXL12Q9NXK8 326 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 APOBEC2Q9Y235 224 aaKnown RBP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 GPSM3Q9Y4H4 160 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 PCDHB9Q9Y5E1 797 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 GTF3C3Q9Y5Q9 886 aa6.65□□□□□ -1.34
HMGN1P16-201ENST00000508308 COL5A1P20908 1838 aaPredicted RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 A0A1B0GTQ1 180 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 EDDM13A0A1B0GTR0 161 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 A0A1W2PPC4 97 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 BICDL2A1A5D9 508 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 TARSL2A2RTX5 802 aaKnown RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 RNF103O00237 685 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 CBX4O00257 560 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 PLK4O00444 970 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 VILLO15195 856 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 FLRT2O43155 660 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 SART1O43290 800 aaKnown RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 LATO43561 262 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 PCDHGA12O60330 932 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 RNASEH2AO75792 299 aaKnown RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 GNA14O95837 355 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 SRPRAP08240 638 aaKnown RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 KRT5P13647 590 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 SLC8A1P32418 973 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 PPP1R2P41236 205 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 ACADSBP45954 432 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 PLK1P53350 603 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms