RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 DBNDD1Q9H9R9 158 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 HPS4Q9NQG7 708 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 ECHDC1Q9NTX5 307 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 SERTAD1Q9UHV2 236 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 PTPRMP28827 1452 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 PFASO15067 1338 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 PHRF1Q9P1Y6 1649 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 CD163L1Q9NR16 1453 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 A0A0G2JMP0 313 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 A0A1B0GTQ1 180 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 TBX3O15119 743 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 GAS7O60861 476 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 LILRB3O75022 631 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 DEAF1O75398 565 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 PALMO75781 387 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 PDGFAP04085 211 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 NPR1P16066 1061 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 PSMC3P17980 439 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 RAB3AP20336 220 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 DDOSTP39656 456 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 GNPDA1P46926 289 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 PRIM2P49643 509 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 TRIP13Q15645 432 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 SGCAQ16586 387 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 UGP2Q16851 508 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 CYP27C1Q4G0S4 372 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 AADACL4Q5VUY2 407 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 TAS1R3Q7RTX0 852 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 KSR1Q8IVT5 923 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 ADGRG2Q8IZP9 1017 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 PQLC1Q8N2U9 271 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 ST13P5Q8NFI4 369 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 OR6C4Q8NGE1 309 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 OR6F1Q8NGZ6 308 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 GOT1L1Q8NHS2 421 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 MGARPQ8TDB4 240 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 SH3YL1Q96HL8 342 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 FEM1CQ96JP0 617 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 PYM1Q9BRP8 204 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 MROH8Q9H579 483 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 FBXO28Q9NVF7 368 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 KANSL3Q9P2N6 904 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 SORCS3Q9UPU3 1222 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 INPP5FQ9Y2H2 1132 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 DCCP43146 1447 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 LINC00862A6NCI5 91 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 H3BMM5 538 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 KCNN4O15554 427 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 AKAP10O43572 662 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 TAF5LO75529 589 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 SPAG6O75602 509 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 USP2O75604 605 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 GH1P01241 217 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 PDIA3P30101 505 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 SLCO1A2P46721 670 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 SCNN1GP51170 649 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 PSMC5P62195 406 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 FOXK2Q01167 660 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 KRR1Q13601 381 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 RRP1BQ14684 758 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 TDRD12Q587J7 1177 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 HGSNATQ68CP4 663 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 RETSATQ6NUM9 610 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 C16orf54Q6UWD8 224 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 KBTBD6Q86V97 674 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 CARM1Q86X55 608 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 IRF2BP1Q8IU81 584 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 MICU2Q8IYU8 434 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 CNDP1Q96KN2 507 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 TEKT5Q96M29 485 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 KIFC3Q9BVG8 833 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 TMUB1Q9BVT8 246 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 SMYD3Q9H7B4 428 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 NANOGQ9H9S0 305 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 IARS2Q9NSE4 1012 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 AGPAT5Q9NUQ2 364 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 GDAQ9Y2T3 454 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 MYO5BQ9ULV0 1848 aa11.03□□□□□ -0.64
PDLIM5-210ENST00000508216 ECM29Q5VYK3 1845 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 A0A1W2PPW3 197 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 LOC390937A0A1W2PQ73 354 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 HEATR9A2RTY3 570 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 ARGFXA6NJG6 315 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 CENPXA8MT69 81 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 LEUTXA8MZ59 168 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 CTDSP2O14595 271 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 GNB5O14775 395 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 GIPC1O14908 333 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 KIAA0391O15091 583 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 NOL3O60936 208 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 NDST3O95803 873 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 PTTG1O95997 202 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 IL6P05231 212 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 POLR3DP05423 398 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 ITGALP20701 1170 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 DNAJB1P25685 340 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 L1CAMP32004 1257 aa11.02□□□□□ -0.65
PDLIM5-210ENST00000508216 POU3F4P49335 361 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms