RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 TMEM215Q68D42 235 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 ATL3Q6DD88 541 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 TBC1D3GQ6DHY5 549 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 TBC1D3CQ6IPX1 549 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 ESRP1Q6NXG1 681 aaKnown RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 JMJD6Q6NYC1 403 aaPredicted RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 C16orf46Q6P387 395 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 SARM1Q6SZW1 724 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 BNC2Q6ZN30 1099 aaPredicted RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 RBM43Q6ZSC3 357 aaKnown RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 PIK3AP1Q6ZUJ8 805 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 SND1Q7KZF4 910 aaKnown RBP eCLIP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 CATSPER3Q86XQ3 398 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 SLFN12Q8IYM2 578 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 TBC1D3Q8IZP1 549 aaPredicted RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 NAGSQ8N159 534 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 NXPE1Q8N323 547 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 ZNF366Q8N895 744 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 Q8NA96 180 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 RNF214Q8ND24 703 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 CCDC148Q8NFR7 591 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 OR14C36Q8NHC7 312 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 KCNB2Q92953 911 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 WBP2Q969T9 261 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 C19orf60Q96EN9 201 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 TAAR9Q96RI9 348 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 IL12RB2Q99665 862 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 FOXC2Q99958 501 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 EIF2AK1Q9BQI3 630 aaKnown RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 NACA2Q9H009 215 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 TMEM134Q9H6X4 195 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 DNAJC28Q9NX36 388 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 DDX43Q9NXZ2 648 aaKnown RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 MAGEC2Q9UBF1 373 aaPredicted RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 CYTH4Q9UIA0 394 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 PADI4Q9UM07 663 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 SMC3Q9UQE7 1217 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 NEU2Q9Y3R4 380 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 PCDHB3Q9Y5E6 796 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 PCDHGB6Q9Y5F9 930 aa4.41□□□□□ -1.7
CPNE4-204ENST00000505331 OAS3Q9Y6K5 1087 aaKnown RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 MORC2Q9Y6X9 1032 aaPredicted RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 MYH9P35579 1960 aaKnown RBP4.41□□□□□ -1.7
CPNE4-204ENST00000505331 CCDC168Q8NDH2 2452 aa4.4□□□□□ -1.7
CPNE4-204ENST00000505331 FN1P02751 2386 aaKnown RBP4.4□□□□□ -1.7
CPNE4-204ENST00000505331 STAB1Q9NY15 2570 aa4.4□□□□□ -1.7
CPNE4-204ENST00000505331 A0A1W2PQM1 296 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 RNF212BA8MTL3 300 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 LACTBL1A8MY62 500 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 KPNA7A9QM74 516 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 INPP4BO15327 924 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 MID1O15344 667 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 AQP9O43315 295 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 ATP8B1O43520 1251 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 KRT86O43790 486 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 ATP2C2O75185 946 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 CSF2P04141 144 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 RPLP0P05388 317 aaKnown RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 TPM1P09493 284 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 NME1P15531 152 aaKnown RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 GOT1P17174 413 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 CYP11B2P19099 503 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 ACAT1P24752 427 aaKnown RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 PSMA5P28066 241 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 HTR1EP28566 365 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 PCSK1P29120 753 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 MAT2AP31153 395 aaKnown RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 ARSDP51689 593 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 ITGA1P56199 1179 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 CCL7P80098 99 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 TLE4Q04727 773 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 MCL1Q07820 350 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 MAPRE1Q15691 268 aaKnown RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 POM121L1PQ3SYA9 428 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 SV2CQ496J9 727 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 SETMARQ53H47 684 aaPredicted RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 ZNF542PQ5EBM4 170 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 MIIPQ5JXC2 388 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 ATP1A1-AS1Q5TC04 95 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 FAM171BQ6P995 826 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 Q71RC1 249 aaPredicted RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 PARS2Q7L3T8 475 aaKnown RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 TRIM69Q86WT6 500 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 HPS6Q86YV9 775 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 DCP2Q8IU60 420 aaKnown RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 APLFQ8IW19 511 aaPredicted RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 CD302Q8IX05 232 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 SLC35F3Q8IY50 421 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 NLGN4XQ8N0W4 816 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 KRT222Q8N1A0 295 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 TMEM86AQ8N2M4 240 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 TMEM145Q8NBT3 493 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 CCDC112Q8NEF3 446 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 NLGN4YQ8NFZ3 816 aaPredicted RBP4.4□□□□□ -1.71
CPNE4-204ENST00000505331 CHTF18Q8WVB6 975 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 HAS1Q92839 578 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 KIFAP3Q92845 792 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 NINJ1Q92982 152 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 PNPLA2Q96AD5 504 aa4.4□□□□□ -1.71
CPNE4-204ENST00000505331 SNRNP40Q96DI7 357 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms