RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 MCF2P10911 925 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 MX2P20592 715 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 RANBP1P43487 201 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 GMPSP49915 693 aaPredicted RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 RBP5P82980 135 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 R3HDM1Q15032 1099 aaKnown RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 MYLK3Q32MK0 819 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 LSM12Q3MHD2 195 aaKnown RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 PIGGQ5H8A4 983 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 C6orf52Q5T4I8 152 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 KLHDC10Q6PID8 442 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 STRA8Q7Z7C7 330 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 CLEC14AQ86T13 490 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 KBTBD7Q8WVZ9 684 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 ISL2Q96A47 359 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 KLRG1Q96E93 195 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 MARK4Q96L34 752 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 SPATA33Q96N06 139 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 RBBP8Q99708 897 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 COPS7BQ9H9Q2 264 aaPredicted RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 GJD2Q9UKL4 321 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 PHF24Q9UPV7 400 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 CDY2AQ9Y6F7 541 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 CDY1Q9Y6F8 540 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 ATP9BO43861 1147 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 VTNP04004 478 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 CCDC130P13994 396 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 ATP6V1B1P15313 513 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 ZFXP17010 805 aaPredicted RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 DCAF15Q66K64 600 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 DLK2Q6UY11 383 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 HIC2Q96JB3 615 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 CNBD2Q96M20 576 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 ZMAT2Q96NC0 199 aaKnown RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 AGAP3Q96P47 875 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 GRIP2Q9C0E4 1043 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 C6orf203Q9P0P8 240 aaPredicted RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 ATXN10Q9UBB4 475 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 AP4B1Q9Y6B7 739 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 A0A096LPK6 155 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 ZCWPW2A0A1B0GU75 182 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 KCNK1O00180 336 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 CLPTM1O96005 669 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 ACAT1P24752 427 aaKnown RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 PCSK6P29122 969 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 RPL26P61254 145 aaKnown RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 CCDC153Q494R4 210 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 FSCBQ5H9T9 825 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 IYDQ6PHW0 289 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 SPNS2Q8IVW8 549 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 RCN3Q96D15 328 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 MFSD3Q96ES6 412 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 KLHL32Q96NJ5 620 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 CPNE1Q99829 537 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 PKP2Q99959 881 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 SENP6Q9GZR1 1112 aaPredicted RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 PREBQ9HCU5 417 aa12.15□□□□□ -0.46
UBE3D-206ENST00000505226 PRMT7Q9NVM4 692 aaPredicted RBP12.15□□□□□ -0.46
UBE3D-206ENST00000505226 A0A0G2JMZ2 1700 aa12.15□□□□□ -0.47
UBE3D-206ENST00000505226 LRRC37A2A6NM11 1700 aa12.15□□□□□ -0.47
UBE3D-206ENST00000505226 DNAH12Q6ZR08 3092 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 GOLGA8TH3BQL2 631 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 MATN2O00339 956 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 GRID2O43424 1007 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 C2P06681 752 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 POLBP06746 335 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 RPL5P46777 297 aaKnown RBP12.14□□□□□ -0.47
UBE3D-206ENST00000505226 CNGA3Q16281 694 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 LRRC23Q53EV4 343 aaPredicted RBP12.14□□□□□ -0.47
UBE3D-206ENST00000505226 GRTP1Q5TC63 336 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 OTUD1Q5VV17 481 aaPredicted RBP12.14□□□□□ -0.47
UBE3D-206ENST00000505226 FBXO16Q8IX29 292 aaPredicted RBP12.14□□□□□ -0.47
UBE3D-206ENST00000505226 FAM156AQ8NDB6 213 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 KIF12Q96FN5 646 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 PRDM12Q9H4Q4 367 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 FAM96AQ9H5X1 160 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 EIF2B3Q9NR50 452 aaKnown RBP12.14□□□□□ -0.47
UBE3D-206ENST00000505226 DDX18Q9NVP1 670 aaKnown RBP12.14□□□□□ -0.47
UBE3D-206ENST00000505226 IRAK4Q9NWZ3 460 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 TXNDC16Q9P2K2 825 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 TK2O00142 265 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 CFLARO15519 480 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 ADORA2BP29275 332 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 LIMK2P53671 638 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 ADGRE1Q14246 886 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 HSP90AA5PQ58FG0 334 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 SLC26A9Q7LBE3 791 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 KYQ8NBH2 561 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 CCNYQ8ND76 341 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 PDGFCQ9NRA1 345 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 ZDHHC2Q9UIJ5 367 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 FZD10Q9ULW2 581 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 GNEQ9Y223 722 aaKnown RBP12.14□□□□□ -0.47
UBE3D-206ENST00000505226 MCM3APO60318 1980 aa12.14□□□□□ -0.47
UBE3D-206ENST00000505226 RGSL1A5PLK6 1076 aa12.13□□□□□ -0.47
UBE3D-206ENST00000505226 TRIM13O60858 407 aa12.13□□□□□ -0.47
UBE3D-206ENST00000505226 PDGFRBP09619 1106 aa12.13□□□□□ -0.47
UBE3D-206ENST00000505226 SRGAP2BP0DMP2 458 aa12.13□□□□□ -0.47
UBE3D-206ENST00000505226 LMO2P25791 158 aa12.13□□□□□ -0.47
UBE3D-206ENST00000505226 USP46P62068 366 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms