RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 PGFP49763 221 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 BFSP2Q13515 415 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 FRG1Q14331 258 aaKnown RBP15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 ARHGEF6Q15052 776 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 CDHR3Q6ZTQ4 885 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 NDUFAF2Q8N183 169 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 ZSCAN18Q8TBC5 510 aaPredicted RBP15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 C1orf74Q96LT6 269 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 SLC13A1Q9BZW2 595 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 SLC40A1Q9NP59 571 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 VANGL2Q9ULK5 521 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 PHF24Q9UPV7 400 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 NEU3Q9UQ49 428 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 RPS6KL1Q9Y6S9 549 aa15.79■□□□□ 0.12
SNCAIP-207ENST00000504884 CFAP73A6NFT4 308 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 TGDSO95455 350 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 ALDH2P05091 517 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 NFKB1P19838 968 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 DNAJB2P25686 324 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 NRG1Q02297 640 aaPredicted RBP15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 MRPL58Q14197 206 aaKnown RBP15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 DDR2Q16832 855 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 CTXN3Q4LDR2 81 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 MANEALQ5VSG8 457 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 PACS1Q6VY07 963 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 TMEM135Q86UB9 458 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 UNC5BQ8IZJ1 945 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 THOC1Q96FV9 657 aaKnown RBP15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 LRRC37BQ96QE4 947 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 MLPHQ9BV36 600 aaPredicted RBP15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 TSSK1BQ9BXA7 367 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 ALG13Q9NP73 1137 aaKnown RBP15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 ADAM28Q9UKQ2 775 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 PATJQ8NI35 1801 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 NUP205Q92621 2012 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 OR6C75A6NL08 312 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 DFFAO00273 331 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 MSI1O43347 362 aaKnown RBP15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 CACNG3O60359 315 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 USP1O94782 785 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 IL1BP01584 269 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 SLC2A3P11169 496 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 CDK7P50613 346 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 MLLT6P55198 1093 aaPredicted RBP15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 STXBP5Q5T5C0 1151 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 FAM171A1Q5VUB5 890 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 MSANTD2Q6P1R3 559 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 LRRC49Q8IUZ0 686 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 ARHGAP12Q8IWW6 846 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 C10orf82Q8WW14 230 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 PTPRN2Q92932 1015 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 CERS2Q96G23 380 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 ECT2Q9H8V3 914 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 ZFATQ9P243 1243 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 TXNDC16Q9P2K2 825 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 TLR6Q9Y2C9 796 aa15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 AAR2Q9Y312 384 aaKnown RBP15.78■□□□□ 0.12
SNCAIP-207ENST00000504884 C2CD2LO14523 706 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 USP12O75317 370 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 CCNB1P14635 433 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 SKIV2L2P42285 1042 aaKnown RBP15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 TUBP50607 506 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 PLEKHG4Q58EX7 1191 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 GRTP1Q5TC63 336 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 NAPEPLDQ6IQ20 393 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 LINC00523Q86TU6 105 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 CEP57Q86XR8 500 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 KLHDC8BQ8IXV7 354 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 ATPAF2Q8N5M1 289 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 DBF4BQ8NFT6 615 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 FCRL3Q96P31 734 aaPredicted RBP15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 CPNE1Q99829 537 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 TRIM55Q9BYV6 548 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 IL22Q9GZX6 179 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 OSER1Q9NX31 292 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 IL37Q9NZH6 218 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 FNIP2Q9P278 1114 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 NUDT5Q9UKK9 219 aa15.77■□□□□ 0.11
SNCAIP-207ENST00000504884 FAM237BA0A1B0GVD1 139 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 MATN3O15232 486 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 NBNO60934 754 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 ATP5HO75947 161 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 BGNP21810 368 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 GRK4P32298 578 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 GP5P40197 560 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 PRMT2P55345 433 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 OLIG2Q13516 323 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 ATG16L1Q676U5 607 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 ZNF280DQ6N043 979 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 TIGD7Q6NT04 549 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 CES3Q6UWW8 571 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 KYAT3Q6YP21 454 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 RASSF3Q86WH2 238 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 CNTD1Q8N815 330 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 ARMC2Q8NEN0 867 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 ATP2A3Q93084 1043 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 SLC39A13Q96H72 371 aa15.76■□□□□ 0.11
SNCAIP-207ENST00000504884 CASD1Q96PB1 797 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms