RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 TIGD6Q17RP2 521 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 SLC9C1Q4G0N8 1177 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 EARS2Q5JPH6 523 aaKnown RBP6.47□□□□□ -1.37
NIPBL-203ENST00000503274 UBE2Q1Q7Z7E8 422 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 RHPN2Q8IUC4 686 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 BCAS4Q8TDM0 211 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 CUL5Q93034 780 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 SIGLEC11Q96RL6 698 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 MYLK2Q9H1R3 596 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 ERVK-5Q9HDB9 667 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 RRP7BPQ9NSQ0 103 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 NDUFAF4Q9P032 175 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 SRP68Q9UHB9 627 aaKnown RBP6.47□□□□□ -1.37
NIPBL-203ENST00000503274 BTBD3Q9Y2F9 522 aa6.47□□□□□ -1.37
NIPBL-203ENST00000503274 KIF15Q9NS87 1388 aa6.46□□□□□ -1.37
NIPBL-203ENST00000503274 SLC22A23A1A5C7 686 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 WDR91A4D1P6 747 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 CNTN5O94779 1100 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 CST5P28325 142 aaPredicted RBP6.46□□□□□ -1.38
NIPBL-203ENST00000503274 SERPINA4P29622 427 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 SLC12A2P55011 1212 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 RPS13P62277 151 aaKnown RBP6.46□□□□□ -1.38
NIPBL-203ENST00000503274 SHC2P98077 582 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 ZNF91Q05481 1191 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 POSTNQ15063 836 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 TRIP6Q15654 476 aaKnown RBP6.46□□□□□ -1.38
NIPBL-203ENST00000503274 GALNTL6Q49A17 601 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 ANO1Q5XXA6 986 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 ZNF474Q6S9Z5 364 aaPredicted RBP6.46□□□□□ -1.38
NIPBL-203ENST00000503274 RRAGAQ7L523 313 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 GALNT15Q8N3T1 639 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 NKAPQ8N5F7 415 aaKnown RBP6.46□□□□□ -1.38
NIPBL-203ENST00000503274 SPATA5Q8NB90 893 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 PRSS3P2Q8NHM4 247 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 RUBCNQ92622 972 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 KAT2BQ92831 832 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 HTATIP2Q9BUP3 242 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 SAYSD1Q9NPB0 183 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 MAST1Q9Y2H9 1570 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 PCDHA10Q9Y5I2 948 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 LTBP4Q8N2S1 1624 aa6.46□□□□□ -1.38
NIPBL-203ENST00000503274 DUOX2Q9NRD8 1548 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 ANKRD30AQ9BXX3 1397 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.45□□□□□ -1.38
NIPBL-203ENST00000503274 DISP3Q9P2K9 1392 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 UGGT1Q9NYU2 1555 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 AGAP5A6NIR3 686 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 C2CD4BA6NLJ0 364 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 H0Y3Z8 333 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 CTSAP10619 480 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 TFEBP19484 476 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 TGM2P21980 687 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 ZKSCAN2Q63HK3 967 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 ADGRF3Q8IZF5 1079 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 OR6Y1Q8NGX8 325 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 CLEC4CQ8WTT0 213 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 TAF1DQ9H5J8 278 aaPredicted RBP6.45□□□□□ -1.38
NIPBL-203ENST00000503274 PPCSQ9HAB8 311 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 LZTS1Q9Y250 596 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 COPG1Q9Y678 874 aaKnown RBP6.45□□□□□ -1.38
NIPBL-203ENST00000503274 DNMT1P26358 1616 aaKnown RBP6.45□□□□□ -1.38
NIPBL-203ENST00000503274 PCSK5Q92824 1860 aa6.45□□□□□ -1.38
NIPBL-203ENST00000503274 ERBINQ96RT1 1412 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 EIF2AK4Q9P2K8 1649 aaKnown RBP6.44□□□□□ -1.38
NIPBL-203ENST00000503274 ALDOCP09972 364 aaKnown RBP6.44□□□□□ -1.38
NIPBL-203ENST00000503274 CDK4P11802 303 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 CPA2P48052 419 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 PCP4P48539 62 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 RCAN1P53805 252 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 ID2Q02363 134 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 LIPMQ5VYY2 423 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 PAPD7Q5XG87 772 aaKnown RBP6.44□□□□□ -1.38
NIPBL-203ENST00000503274 DEF8Q6ZN54 512 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 ZFPM2Q8WW38 1151 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 RPL36ALQ969Q0 106 aaKnown RBP6.44□□□□□ -1.38
NIPBL-203ENST00000503274 HERPUD2Q9BSE4 406 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 SLC29A3Q9BZD2 475 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 ABHD16BQ9H3Z7 469 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 SEPSECSQ9HD40 501 aaKnown RBP6.44□□□□□ -1.38
NIPBL-203ENST00000503274 IPO11Q9UI26 975 aaKnown RBP6.44□□□□□ -1.38
NIPBL-203ENST00000503274 BAG5Q9UL15 447 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 MORC2Q9Y6X9 1032 aaPredicted RBP6.44□□□□□ -1.38
NIPBL-203ENST00000503274 SHANK2Q9UPX8 1470 aa6.44□□□□□ -1.38
NIPBL-203ENST00000503274 ZC3H13Q5T200 1668 aaKnown RBP6.44□□□□□ -1.38
NIPBL-203ENST00000503274 RNF17Q9BXT8 1623 aaKnown RBP6.43□□□□□ -1.38
NIPBL-203ENST00000503274 ABCC5O15440 1437 aa6.43□□□□□ -1.38
NIPBL-203ENST00000503274 NPHP4O75161 1426 aaPredicted RBP6.43□□□□□ -1.38
NIPBL-203ENST00000503274 FGD6Q6ZV73 1430 aa6.43□□□□□ -1.38
NIPBL-203ENST00000503274 COL3A1P02461 1466 aaPredicted RBP6.43□□□□□ -1.38
NIPBL-203ENST00000503274 HEXIM1O94992 359 aaKnown RBP6.43□□□□□ -1.38
NIPBL-203ENST00000503274 HOXD9P28356 352 aaPredicted RBP6.43□□□□□ -1.38
NIPBL-203ENST00000503274 HALP42357 657 aa6.43□□□□□ -1.38
NIPBL-203ENST00000503274 MMP13P45452 471 aa6.43□□□□□ -1.38
NIPBL-203ENST00000503274 PRKAA2P54646 552 aa6.43□□□□□ -1.38
NIPBL-203ENST00000503274 Q4G0T1 1027 aa6.43□□□□□ -1.38
NIPBL-203ENST00000503274 DGAT2L7PQ6IED9 249 aa6.43□□□□□ -1.38
NIPBL-203ENST00000503274 FAM57BQ71RH2 274 aa6.43□□□□□ -1.38
NIPBL-203ENST00000503274 FAM47BQ8NA70 645 aa6.43□□□□□ -1.38
NIPBL-203ENST00000503274 SLC2A12Q8TD20 617 aa6.43□□□□□ -1.38
NIPBL-203ENST00000503274 ZNF347Q96SE7 839 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms