RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 GNL1P36915 607 aaPredicted RBP12.74□□□□□ -0.37
AFF3-215ENST00000498090 GARSP41250 739 aaKnown RBP12.74□□□□□ -0.37
AFF3-215ENST00000498090 PTDSS1P48651 473 aaKnown RBP12.74□□□□□ -0.37
AFF3-215ENST00000498090 CLCNKBP51801 687 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 MRPS35P82673 323 aaKnown RBP12.74□□□□□ -0.37
AFF3-215ENST00000498090 GBE1Q04446 702 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 FPGSQ05932 587 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 NIPAL4Q0D2K0 466 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 PPIGQ13427 754 aaKnown RBP eCLIP12.74□□□□□ -0.37
AFF3-215ENST00000498090 TUSC3Q13454 348 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 CCDC6Q16204 474 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 FAXCQ5TGI0 409 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 CD300LGQ6UXG3 332 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 LIMS2Q7Z4I7 341 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 URGCPQ8TCY9 931 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 KCTD15Q96SI1 283 aaPredicted RBP12.74□□□□□ -0.37
AFF3-215ENST00000498090 SLC13A1Q9BZW2 595 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 BRD8Q9H0E9 1235 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 SMYD2Q9NRG4 433 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 ZNF212Q9UDV6 495 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 DNAJB4Q9UDY4 337 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 CORO1CQ9ULV4 474 aaPredicted RBP12.74□□□□□ -0.37
AFF3-215ENST00000498090 FZD10Q9ULW2 581 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 STAP1Q9ULZ2 295 aa12.74□□□□□ -0.37
AFF3-215ENST00000498090 KPNA7A9QM74 516 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 F8W810 466 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 SPECC1L-ADORA2AF8WAN1 911 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 ENTPD5O75356 428 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 UPP2O95045 317 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 TAF6P49848 677 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 ZNF135P52742 658 aaPredicted RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 SLC34A1Q06495 639 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 SLC10A2Q12908 348 aaPredicted RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 UPP1Q16831 310 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 TRMT5Q32P41 509 aaKnown RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 SV2CQ496J9 727 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 PRPF38BQ5VTL8 546 aaKnown RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 OTOP2Q7RTS6 562 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 NET1Q7Z628 596 aaPredicted RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 ARID3BQ8IVW6 561 aaPredicted RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 COLGALT2Q8IYK4 626 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 PPFIBP2Q8ND30 876 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 APPL2Q8NEU8 664 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 PPP1R14CQ8TAE6 165 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 DNAJC9Q8WXX5 260 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 KCTD13Q8WZ19 329 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 SLC9A7Q96T83 725 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 NMUR2Q9GZQ4 415 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 RC3H2Q9HBD1 1191 aaKnown RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 FBXO6Q9NRD1 293 aaPredicted RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 PCMTD2Q9NV79 361 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 STX18Q9P2W9 335 aaKnown RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 ADAM28Q9UKQ2 775 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 HBS1LQ9Y450 684 aaKnown RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 NUMBLQ9Y6R0 609 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 SCN1AP35498 2009 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 TBKBP1A7MCY6 615 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 AP3B1O00203 1094 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 NCAM2O15394 837 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 MTSS1O43312 755 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 CIB2O75838 187 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 GABBR2O75899 941 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 BAIAP3O94812 1187 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 KLHL2O95198 593 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 AOC1P19801 751 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 NOS2P35228 1153 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 PGM1P36871 562 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 LILRA4P59901 499 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 MUM1Q2TAK8 710 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 KHDC1Q4VXA5 237 aaKnown RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 SPANXN3Q5MJ09 141 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 TMEM240Q5SV17 173 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 SYCP2LQ5T4T6 812 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 MROH9Q5TGP6 573 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 RINLQ6ZS11 566 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 ABI1Q8IZP0 508 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 TOP6BLQ8N6T0 577 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 COLGALT1Q8NBJ5 622 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 TOP1MTQ969P6 601 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 NT5C3BQ969T7 300 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 HNRNPABQ99729 332 aaKnown RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 B3GNT5Q9BYG0 378 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 IGSF9Q9P2J2 1179 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 TXNDC16Q9P2K2 825 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 ANGPTL2Q9UKU9 493 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 NME7Q9Y5B8 376 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.73□□□□□ -0.37
AFF3-215ENST00000498090 LAMA3Q16787 3333 aa12.73□□□□□ -0.37
AFF3-215ENST00000498090 PTPRSQ13332 1948 aa12.72□□□□□ -0.37
AFF3-215ENST00000498090 HMX2A2RU54 273 aa12.72□□□□□ -0.37
AFF3-215ENST00000498090 ERI2A8K979 691 aaKnown RBP12.72□□□□□ -0.37
AFF3-215ENST00000498090 NVLO15381 856 aaKnown RBP12.72□□□□□ -0.37
AFF3-215ENST00000498090 HOXA2O43364 376 aa12.72□□□□□ -0.37
AFF3-215ENST00000498090 EFCAB14O75071 495 aa12.72□□□□□ -0.37
AFF3-215ENST00000498090 PSMG1O95456 288 aa12.72□□□□□ -0.37
AFF3-215ENST00000498090 AMHP03971 560 aa12.72□□□□□ -0.37
AFF3-215ENST00000498090 SERPINE1P05121 402 aa12.72□□□□□ -0.37
AFF3-215ENST00000498090 ITGB1P05556 798 aa12.72□□□□□ -0.37
AFF3-215ENST00000498090 POLBP06746 335 aa12.72□□□□□ -0.37
AFF3-215ENST00000498090 LCP1P13796 627 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms