RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 LZTR1Q8N653 840 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 RTL3Q8N8U3 475 aaKnown RBP11.49□□□□□ -0.57
LRRC55-201ENST00000497933 SLC35C1Q96A29 364 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 SLC25A23Q9BV35 468 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 TIMMDC1Q9NPL8 285 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 TBC1D13Q9NVG8 400 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 A0A087X0B3 334 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 TMEM114B3SHH9 223 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 MRASO14807 208 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 KATNA1O75449 491 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 NME5P56597 212 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 XIAPP98170 497 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 DNAJB3Q8WWF6 145 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 ROGDIQ9GZN7 287 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 PCDHA3Q9Y5H8 950 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 CD3EAPO15446 510 aaKnown RBP11.49□□□□□ -0.57
LRRC55-201ENST00000497933 BAIAP3O94812 1187 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 MSH3P20585 1137 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 CDH3P22223 829 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 CDC16Q13042 620 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 RETSATQ6NUM9 610 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 KYAT3Q6YP21 454 aaKnown RBP11.49□□□□□ -0.57
LRRC55-201ENST00000497933 IQCKQ8N0W5 287 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 ACTL9Q8TC94 416 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 ARHGEF3Q9NR81 526 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 TSPAN16Q9UKR8 245 aa11.49□□□□□ -0.57
LRRC55-201ENST00000497933 RCCD1A6NED2 376 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 MGAT4DA6NG13 374 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 JCHAINP01591 159 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 PTPRAP18433 802 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 CRABP2P29373 138 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 RAP1GAPP47736 663 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 PLIN5Q00G26 463 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 PPIL2Q13356 520 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 FASTKQ14296 549 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 TSNQ15631 228 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 PAN2Q504Q3 1202 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 RIOX2Q8IUF8 465 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 ZCCHC9Q8N567 271 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 WDR36Q8NI36 951 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 TRPC4APQ8TEL6 797 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 ASB2Q96Q27 587 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 CDRT15Q96T59 188 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 CLPBQ9H078 707 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 SEMA6AQ9H2E6 1030 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 RENBPP51606 427 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 NDST1P52848 882 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 MAPK10P53779 464 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 RHOAP61586 193 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 YWHAZP63104 245 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 PLD1Q13393 1074 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 ACVR2BQ13705 512 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 CSHL1Q14406 222 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 PGS1Q32NB8 556 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 C2CD6Q53TS8 623 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 WDR59Q6PJI9 974 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 TRIM74Q86UV6 250 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 TRIM73Q86UV7 250 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 FHDC1Q9C0D6 1143 aaPredicted RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 XPNPEP3Q9NQH7 507 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 DKK3Q9UBP4 350 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 LSM1O15116 133 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 INPP4BO15327 924 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 ALOX12P18054 663 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 PSEN2P49810 448 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 MRPS22P82650 360 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 FOLH1Q04609 750 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 KLHL12Q53G59 568 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 TYW3Q6IPR3 259 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 NEK10Q6ZWH5 1172 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 TMC7Q7Z402 723 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 SMARCD1Q96GM5 515 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 PRDM16Q9HAZ2 1276 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 PNMA8BQ9ULN7 279 aaPredicted RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 UMODL1Q5DID0 1318 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 TRDMT1O14717 391 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 CABYRO75952 493 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 FESP07332 822 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 VCLP18206 1134 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 ELK3P41970 407 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 GSCP56915 257 aaPredicted RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 PDK4Q16654 411 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 SPANXN3Q5MJ09 141 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 C11orf88Q6PI97 169 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 SH3RF1Q7Z6J0 888 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 CAMK1DQ8IU85 385 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 BHLHE22Q8NFJ8 381 aaPredicted RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 CPNE1Q99829 537 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 ELOVL4Q9GZR5 314 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 STN1Q9H668 368 aaKnown RBP11.48□□□□□ -0.57
LRRC55-201ENST00000497933 HPS4Q9NQG7 708 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 GPATCH2LQ9NWQ4 482 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 VANGL2Q9ULK5 521 aa11.48□□□□□ -0.57
LRRC55-201ENST00000497933 UBXN8O00124 270 aa11.47□□□□□ -0.57
LRRC55-201ENST00000497933 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
LRRC55-201ENST00000497933 GLP2RO95838 553 aa11.47□□□□□ -0.57
LRRC55-201ENST00000497933 KRT6AP02538 564 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms