RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 ZFP37Q9Y6Q3 630 aaPredicted RBP17.33■□□□□ 0.36
LMNA-216ENST00000496738 DENND4CQ5VZ89 1909 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 IGLV3-10A0A075B6K4 115 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 GOLGA8MH3BSY2 632 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 RHOQP17081 205 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 HOXA9P31269 272 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 ACTN2P35609 894 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 RPS24P62847 133 aaKnown RBP17.32■□□□□ 0.36
LMNA-216ENST00000496738 CASP8Q14790 479 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 SWT1Q5T5J6 900 aaKnown RBP17.32■□□□□ 0.36
LMNA-216ENST00000496738 ANKRD22Q5VYY1 191 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 EIF1ADQ8N9N8 165 aaKnown RBP17.32■□□□□ 0.36
LMNA-216ENST00000496738 CAVIN3Q969G5 261 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 LRRC45Q96CN5 670 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 RTP4Q96DX8 246 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 LMAN2LQ9H0V9 348 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 BMP8BP34820 402 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 EPHA5P54756 1037 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 GAD2Q05329 585 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 HIBCHQ6NVY1 386 aaPredicted RBP17.32■□□□□ 0.36
LMNA-216ENST00000496738 NOL6Q9H6R4 1146 aaKnown RBP17.32■□□□□ 0.36
LMNA-216ENST00000496738 ZDHHC7Q9NXF8 308 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 CCL26Q9Y258 94 aa17.32■□□□□ 0.36
LMNA-216ENST00000496738 DRGXA6NNA5 263 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 DHX9Q08211 1270 aaKnown RBP17.31■□□□□ 0.36
LMNA-216ENST00000496738 PPIDQ08752 370 aaKnown RBP17.31■□□□□ 0.36
LMNA-216ENST00000496738 MTM1Q13496 603 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 RNASEH2BQ5TBB1 312 aaKnown RBP17.31■□□□□ 0.36
LMNA-216ENST00000496738 ATPAF2Q8N5M1 289 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 CPT1BQ92523 772 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 SMG7Q92540 1137 aaKnown RBP17.31■□□□□ 0.36
LMNA-216ENST00000496738 BHMTQ93088 406 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 RAB6BQ9NRW1 208 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 TMEM248Q9NWD8 314 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 MTRF1LQ9UGC7 380 aaKnown RBP17.31■□□□□ 0.36
LMNA-216ENST00000496738 CDH22Q9UJ99 828 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 ATP8A1Q9Y2Q0 1164 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 TRANK1O15050 2925 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 TCRBV7S3A2A0A539 114 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 GREM1O60565 184 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 MX2P20592 715 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 OR1E1P30953 314 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 PAPOLAP51003 745 aaKnown RBP17.31■□□□□ 0.36
LMNA-216ENST00000496738 SLC7A9P82251 487 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 WASHC5Q12768 1159 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 ADGRF1Q5T601 910 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 RHBDF2Q6PJF5 856 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 RTL10Q7L3V2 364 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 ZNF354CQ86Y25 554 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 USP33Q8TEY7 942 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 HDAC11Q96DB2 347 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 PAK5Q9P286 719 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 DPP7Q9UHL4 492 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 RAD54BQ9Y620 910 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 NUP205Q92621 2012 aa17.31■□□□□ 0.36
LMNA-216ENST00000496738 NYNRINQ9P2P1 1898 aaKnown RBP17.3■□□□□ 0.36
LMNA-216ENST00000496738 WASH4PA8MWX3 477 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 NCAM2O15394 837 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 METTL18O95568 372 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 CEBPBP17676 345 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 AVPR1AP37288 418 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 ZBTB17Q13105 803 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 CBX2Q14781 532 aaPredicted RBP17.3■□□□□ 0.36
LMNA-216ENST00000496738 ANKRD20A2Q5SQ80 823 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 ANKRD20A1Q5TYW2 823 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 ANKRD20A3Q5VUR7 823 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 ARHGEF18Q6ZSZ5 1173 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 HDXQ7Z353 690 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 TMC3Q7Z5M5 1100 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.3■□□□□ 0.36
LMNA-216ENST00000496738 BBOF1Q8ND07 529 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 ZNF212Q9UDV6 495 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 CLUHO75153 1309 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 LEFTY2O00292 366 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 LINC01565O15544 149 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 C1RP00736 705 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 ARHGAP15Q53QZ3 475 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 PRSS36Q5K4E3 855 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 RABGAP1LQ5R372 815 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 UBAP2Q5T6F2 1119 aaKnown RBP17.3■□□□□ 0.36
LMNA-216ENST00000496738 POTEHQ6S545 545 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 CCDC13Q8IYE1 715 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 CMTM8Q8IZV2 173 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 ZNF567Q8N184 647 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 LZTR1Q8N653 840 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.3■□□□□ 0.36
LMNA-216ENST00000496738 MRPL38Q96DV4 380 aaKnown RBP17.3■□□□□ 0.36
LMNA-216ENST00000496738 HMCESQ96FZ2 354 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 ZSWIM3Q96MP5 696 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 SHROOM3Q8TF72 1996 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 NOTCH4Q99466 2003 aa17.3■□□□□ 0.36
LMNA-216ENST00000496738 DOCK4Q8N1I0 1966 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 A0A0A0MRY4 1105 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 C5orf60A6NFR6 353 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 ATP8B1O43520 1251 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 GCATO75600 419 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 STK10O94804 968 aaKnown RBP17.29■□□□□ 0.36
LMNA-216ENST00000496738 TMEM63AO94886 807 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 FGF19O95750 216 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 PTPN3P26045 913 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms