RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	TDRD12	Q587J7	1177 aa	Known RBP	16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	MBLAC2	Q68D91	279 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	SDE2	Q6IQ49	451 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	DNAJC24	Q6P3W2	148 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	ZNF683	Q8IZ20	524 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	AHI1	Q8N157	1196 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	CCAR2	Q8N163	923 aa	Known RBP	16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	UCMA	Q8WVF2	138 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	ZCCHC14	Q8WYQ9	949 aa	Known RBP	16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	CENPI	Q92674	756 aa	Predicted RBP	16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	IQCD	Q96DY2	449 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	VCPIP1	Q96JH7	1222 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	RPRD1A	Q96P16	312 aa	Predicted RBP	16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	MCEE	Q96PE7	176 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	MAGEB5	Q9BZ81	275 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	RBSN	Q9H1K0	784 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	POLM	Q9NP87	494 aa	Predicted RBP	16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	ADAMTS20	P59510	1910 aa		16.34	■□□□□ 0.21
PRKCZ-222	ENST00000496325	ASCC3	Q8N3C0	2202 aa	Known RBP	16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	DCLK1	O15075	740 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	TIMM44	O43615	452 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	RTN2	O75298	545 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	CNTN5	O94779	1100 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	SERPING1	P05155	500 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	GABRG2	P18507	467 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	PRKCH	P24723	683 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	HDAC4	P56524	1084 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	MTA1	Q13330	715 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	CDH18	Q13634	790 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	PTPRN	Q16849	979 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	C5orf22	Q49AR2	442 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	RABGAP1L	Q5R372	815 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	SPECC1L	Q69YQ0	1117 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	STRADA	Q7RTN6	431 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	VSTM4	Q8IW00	320 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	APCDD1	Q8J025	514 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	OR52K2	Q8NGK3	314 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	FAM172A	Q8WUF8	416 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	HMGB4	Q8WW32	186 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	EDEM2	Q9BV94	578 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	SLC6A17	Q9H1V8	727 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	ARHGAP20	Q9P2F6	1191 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325	ADAMTS1	Q9UHI8	967 aa		16.33	■□□□□ 0.2
PRKCZ-222	ENST00000496325		A0A1B0GVM2	712 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	TCAF2	A6NFQ2	919 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	LOC400499	M0QZD8	3231 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	CCP110	O43303	1012 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	ALDH1A2	O94788	518 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	HLA-E	P13747	358 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	POLR2E	P19388	210 aa	Known RBP	16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	MZF1	P28698	734 aa	Predicted RBP	16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	CSK	P41240	450 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	MAMLD1	Q13495	774 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	ALF	Q53S48	1182 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	PITRM1	Q5JRX3	1037 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	PLEKHA7	Q6IQ23	1121 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	CXorf57	Q6NSI4	855 aa	Known RBP	16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	PPP1R2P3	Q6NXS1	205 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	GAS2L3	Q86XJ1	694 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	PGBD3	Q8N328	593 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	CCDC185	Q8N715	623 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	FRMD1	Q8N878	549 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	ZNF366	Q8N895	744 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	ZNF557	Q8N988	423 aa	Predicted RBP	16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	TTC17	Q96AE7	1141 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	MYO19	Q96H55	970 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	C1orf74	Q96LT6	269 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	SMG1	Q96Q15	3661 aa	Known RBP	16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	HAPLN3	Q96S86	360 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	16.32	■□□□□ 0.2	6e-6	■■■■□ 22.8
PRKCZ-222	ENST00000496325	ISCU	Q9H1K1	167 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	KIAA1522	Q9P206	1035 aa	Predicted RBP	16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	PAXBP1	Q9Y5B6	917 aa		16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	BZW2	Q9Y6E2	419 aa	Known RBP	16.32	■□□□□ 0.2
PRKCZ-222	ENST00000496325	DOCK9	Q9BZ29	2069 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	LAMA5	O15230	3695 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	GCN1	Q92616	2671 aa	Known RBP	16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325		A0A087X0T9	212 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	DRGX	A6NNA5	263 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	TAF4	O00268	1085 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	NPC1	O15118	1278 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	FAM228B	P0C875	321 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	ADRA1B	P35368	520 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	CTSO	P43234	321 aa	Predicted RBP	16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	ZNF143	P52747	638 aa	Predicted RBP	16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	PLK5	Q496M5	336 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	TTC39B	Q5VTQ0	682 aa	Predicted RBP	16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	DCUN1D2	Q6PH85	259 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	CCDC117	Q8IWD4	279 aa	Predicted RBP	16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	RLN3	Q8WXF3	142 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	TRIM7	Q9C029	511 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	DUSP15	Q9H1R2	295 aa	Predicted RBP	16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	TMEM245	Q9H330	911 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	VPS45	Q9NRW7	570 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	TMEM51	Q9NW97	253 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	MPP6	Q9NZW5	540 aa		16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	BCCIP	Q9P287	314 aa	Known RBP eCLIP	16.31	■□□□□ 0.2	1e-6	■■■■■ 35.1
PRKCZ-222	ENST00000496325	CNOT8	Q9UFF9	292 aa	Known RBP	16.31	■□□□□ 0.2
PRKCZ-222	ENST00000496325	PCDHGA5	Q9Y5G8	931 aa		16.31	■□□□□ 0.2

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms