RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 CAVIN1Q6NZI2 390 aaKnown RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 FAM131BQ86XD5 332 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 MMAAQ8IVH4 418 aaKnown RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 CCDC117Q8IWD4 279 aaPredicted RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 ZNF683Q8IZ20 524 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 STK40Q8N2I9 435 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 MINDY1Q8N5J2 469 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 JOSD2Q8TAC2 188 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 PTPRN2Q92932 1015 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 NT5C3BQ969T7 300 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 CNTNAP3BQ96NU0 1288 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 SPAG5Q96R06 1193 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 C11orf70Q9BRQ4 267 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 NUP58Q9BVL2 599 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 CNTNAP3Q9BZ76 1288 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 IRX2Q9BZI1 471 aaPredicted RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 RSPH9Q9H1X1 276 aaPredicted RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 WDCPQ9H6R7 721 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 RYDENQ9NUL5 291 aaKnown RBP10.94□□□□□ -0.66
NELFE-213ENST00000494956 ARHGEF38Q9NXL2 777 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 MPP6Q9NZW5 540 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 SUN2Q9UH99 717 aa10.94□□□□□ -0.66
NELFE-213ENST00000494956 A0A1B0GVM2 712 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 A0A1W2PP55 124 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 TCAF2A6NFQ2 919 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 FAM47DPA6NHR8 397 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 SNAP91O60641 907 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 MOCS3O95396 460 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 MBD3O95983 291 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 DNTTP04053 509 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 ASLP04424 464 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 CYP1A1P04798 512 aaPredicted RBP10.93□□□□□ -0.66
NELFE-213ENST00000494956 TPM2P07951 284 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 SPINK2P20155 84 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 PSMD8P48556 350 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 SNX16P57768 344 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 CDO1Q16878 200 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 POM121L1PQ3SYA9 428 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 RABGAP1LQ5R372 815 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 SYCP2LQ5T4T6 812 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 RNF219Q5W0B1 726 aaPredicted RBP10.93□□□□□ -0.66
NELFE-213ENST00000494956 TFAP2DQ7Z6R9 452 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 DNAAF5Q86Y56 855 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 ZDHHC17Q8IUH5 632 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 NEK11Q8NG66 645 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 GANCQ8TET4 914 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 DNASE2BQ8WZ79 361 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 FOXJ1Q92949 421 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 CAMK1GQ96NX5 476 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 FAM129BQ96TA1 746 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 NEUROG2Q9H2A3 272 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 IL21RQ9HBE5 538 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 STAP1Q9ULZ2 295 aa10.93□□□□□ -0.66
NELFE-213ENST00000494956 ITIH6Q6UXX5 1313 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.92□□□□□ -0.66
NELFE-213ENST00000494956 A0A0D9SEW6 157 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 A0A1B0GVT2 93 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 RNF103O00237 685 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 ARHGAP33O14559 1287 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 BNIP3LO60238 219 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 SRGAP2O75044 1071 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 FSBPO95073 299 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 SEMA4FO95754 770 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 LSM8O95777 96 aaKnown RBP10.92□□□□□ -0.66
NELFE-213ENST00000494956 MT-CO1P00395 513 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 SRPRAP08240 638 aaKnown RBP10.92□□□□□ -0.66
NELFE-213ENST00000494956 UNGP13051 313 aaPredicted RBP10.92□□□□□ -0.66
NELFE-213ENST00000494956 MMP8P22894 467 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 GLDCP23378 1020 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 OXTRP30559 389 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 SCNN1AP37088 669 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 STAT1P42224 750 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 CSNK1EP49674 416 aaKnown RBP10.92□□□□□ -0.66
NELFE-213ENST00000494956 ATXN3P54252 364 aaPredicted RBP10.92□□□□□ -0.66
NELFE-213ENST00000494956 FAM193AP78312 1265 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 PTP4A2Q12974 167 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 GRIK2Q13002 908 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 ZNF177Q13360 481 aaPredicted RBP10.92□□□□□ -0.66
NELFE-213ENST00000494956 E2F5Q15329 346 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 CST6Q15828 149 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 SLC25A52Q3SY17 297 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 KCNT1Q5JUK3 1230 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 WDR45BQ5MNZ6 344 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 BNIPLQ7Z465 357 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 AADATQ8N5Z0 425 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 ZNF557Q8N988 423 aaPredicted RBP10.92□□□□□ -0.66
NELFE-213ENST00000494956 CADM4Q8NFZ8 388 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 C1orf216Q8TAB5 229 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 CEP76Q8TAP6 659 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 RXFP2Q8WXD0 754 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 BIRC7Q96CA5 298 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 ERGIC2Q96RQ1 377 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 PSMB7Q99436 277 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 FEM1AQ9BSK4 669 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 BTBD1Q9H0C5 482 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 PABPC3Q9H361 631 aaKnown RBP10.92□□□□□ -0.66
NELFE-213ENST00000494956 EBF2Q9HAK2 575 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 SEPT11Q9NVA2 429 aaKnown RBP10.92□□□□□ -0.66
NELFE-213ENST00000494956 FBXL12Q9NXK8 326 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 VPS28Q9UK41 221 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms