RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 DPP10Q8N608 796 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 C16orf52Q8NHV5 167 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.64□□□□□ -1.99
LMNB1-207ENST00000494185 SPPL3Q8TCT6 385 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 LPAR1Q92633 364 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 OTULINQ96BN8 352 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 TRAPPC9Q96Q05 1148 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 SIGLEC11Q96RL6 698 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 PIGSQ96S52 555 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 DDX23Q9BUQ8 820 aaKnown RBP2.64□□□□□ -1.99
LMNB1-207ENST00000494185 MECRQ9BV79 373 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 C1QTNF7Q9BXJ2 289 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 TMX4Q9H1E5 349 aaPredicted RBP2.64□□□□□ -1.99
LMNB1-207ENST00000494185 TAF1DQ9H5J8 278 aaPredicted RBP2.64□□□□□ -1.99
LMNB1-207ENST00000494185 WASH6PQ9NQA3 447 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 PDGFCQ9NRA1 345 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 TMEM45AQ9NWC5 275 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 KIF17Q9P2E2 1029 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 SRP68Q9UHB9 627 aaKnown RBP2.64□□□□□ -1.99
LMNB1-207ENST00000494185 SLC13A4Q9UKG4 626 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 RAB21Q9UL25 225 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 TRPC5Q9UL62 973 aaPredicted RBP2.64□□□□□ -1.99
LMNB1-207ENST00000494185 SLC12A4Q9UP95 1085 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 BTBD3Q9Y2F9 522 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 ZNF521Q96K83 1311 aa2.64□□□□□ -1.99
LMNB1-207ENST00000494185 GAGE12JA6NER3 117 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 RRN3P2A6NIE6 340 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 H0Y3Z8 333 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 EYA2O00167 538 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 MSI1O43347 362 aaKnown RBP2.63□□□□□ -1.99
LMNB1-207ENST00000494185 MOSPD3O75425 235 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 BAIAP3O94812 1187 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 CYP3A4P08684 503 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 CTSAP10619 480 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 TNFAIP3P21580 790 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 SFPQP23246 707 aaKnown RBP eCLIP2.63□□□□□ -1.99
LMNB1-207ENST00000494185 CIITAP33076 1130 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 ENTPD1P49961 510 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 PAPOLAP51003 745 aaKnown RBP2.63□□□□□ -1.99
LMNB1-207ENST00000494185 ZNF84P51523 738 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 FAM3BP58499 235 aaPredicted RBP2.63□□□□□ -1.99
LMNB1-207ENST00000494185 MPP1Q00013 466 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 KCTD2Q14681 263 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 SEC23BQ15437 767 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 GALNTL6Q49A17 601 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 COLEC12Q5KU26 742 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 TTC39AQ5SRH9 613 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 MANEAQ5SRI9 462 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 DAB2IPQ5VWQ8 1189 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 DGAT2L7PQ6IED9 249 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 C1orf122Q6ZSJ8 110 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 RRAGAQ7L523 313 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 LRRTM4Q86VH4 590 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 KLBQ86Z14 1044 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 CAMK1DQ8IU85 385 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 FSIP1Q8NA03 581 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 OR6Y1Q8NGX8 325 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 THAP4Q8WY91 577 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 GOLGA1Q92805 767 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 CELF1Q92879 486 aaKnown RBP2.63□□□□□ -1.99
LMNB1-207ENST00000494185 TRMT61AQ96FX7 289 aaKnown RBP2.63□□□□□ -1.99
LMNB1-207ENST00000494185 GPR78Q96P69 363 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 SEC62Q99442 399 aaKnown RBP2.63□□□□□ -1.99
LMNB1-207ENST00000494185 EIF2AK1Q9BQI3 630 aaKnown RBP2.63□□□□□ -1.99
LMNB1-207ENST00000494185 FAM167BQ9BTA0 163 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 IFT27Q9BW83 186 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 FZD3Q9NPG1 666 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 ITM2CQ9NQX7 267 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 RNF146Q9NTX7 359 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 NRBP1Q9UHY1 535 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 CRYL1Q9Y2S2 319 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 SLC4A4Q9Y6R1 1079 aa2.63□□□□□ -1.99
LMNB1-207ENST00000494185 ARHGEF17Q96PE2 2063 aaPredicted RBP2.63□□□□□ -1.99
LMNB1-207ENST00000494185 CYP3A7-CYP3A51PA0A087WV96 503 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 FAM90A10PA6NDY2 464 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 AGAP5A6NIR3 686 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 C16orf96A6NNT2 1141 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 E7EVH7 732 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 INO80B-WBP1J3KQ70 363 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 RRHO14718 337 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 TLR2O60603 784 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 CNOT3O75175 753 aaKnown RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 FAM155BO75949 473 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 CNTN5O94779 1100 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 MBD4O95243 580 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 DDX58O95786 925 aaKnown RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 IGKV2-30P06310 120 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 PYGLP06737 847 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 PEPDP12955 493 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 ST6GAL1P15907 406 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 IGFBP2P18065 325 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 CAPN3P20807 821 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 CYP3A7P24462 503 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 GSTM2P28161 218 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 ADD2P35612 726 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 AARSP49588 968 aaKnown RBP eCLIP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 RCAN1P53805 252 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 PRKAA2P54646 552 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 SLC37A1P57057 533 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 FOXL2P58012 376 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms