RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 NEU2Q9Y3R4 380 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 SCINQ9Y6U3 715 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 LRRD1A4D1F6 860 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 SMIM23A6NLE4 172 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 PATE3B3GLJ2 98 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 H0YCG3 227 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 I3L4J1 428 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 PRRG1O14668 218 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 TM9SF1O15321 606 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 C1QL1O75973 258 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 SEC24AO95486 1093 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 RPSAP08865 295 aaKnown RBP10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 TROVE2P10155 538 aaKnown RBP eCLIP10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 CHRNB2P17787 502 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 TKTP29401 623 aaKnown RBP10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 NMT1P30419 496 aaKnown RBP10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 QARSP47897 775 aaKnown RBP10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 CYP2J2P51589 502 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 FMO1Q01740 532 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 CYP4A11Q02928 519 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 CDK18Q07002 472 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 KLF1Q13351 362 aaPredicted RBP10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 CAPSQ13938 189 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 MXD4Q14582 209 aaPredicted RBP10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 MORF4L2Q15014 288 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 TEAD2Q15562 447 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 GSTA3Q16772 222 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 ARHGAP44Q17R89 818 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 LONRF1Q17RB8 773 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 CLEC16AQ2KHT3 1053 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 UAP1L1Q3KQV9 507 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 LRRC38Q5VT99 294 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 TPGS2Q68CL5 300 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 CD300LGQ6UXG3 332 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 TRABD2AQ86V40 505 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 CCDC25Q86WR0 208 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 MFN1Q8IWA4 741 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 RHOT1Q8IXI2 618 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 EXD1Q8NHP7 514 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 SHKBP1Q8TBC3 707 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 MAML1Q92585 1016 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 DYDC2Q96IM9 177 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 RBM41Q96IZ5 413 aaKnown RBP10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 ZNF512Q96ME7 567 aaPredicted RBP10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 NT5C1BQ96P26 610 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 LRRC3BQ96PB8 259 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 TRAPPC9Q96Q05 1148 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 SMC6Q96SB8 1091 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 ETNK1Q9HBU6 452 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 SNTG2Q9NY99 539 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 TAS2R14Q9NYV8 317 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 DKK4Q9UBT3 224 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 MAFFQ9ULX9 164 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 CITO14578 2027 aa10.95□□□□□ -0.66
PDLIM1-205ENST00000493949 PIEZO2Q9H5I5 2752 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 C2orf72A6NCS6 295 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 A8MXQ7 604 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 RASA4BC9J798 803 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 K7ENM7 598 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 TRDMT1O14717 391 aaKnown RBP10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 DCLK1O15075 740 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 TP73O15350 636 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 RASA4O43374 803 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 DKC1O60832 514 aaKnown RBP eCLIP10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 EDF1O60869 148 aaKnown RBP10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 TGDSO95455 350 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 ACSL3O95573 720 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 EDN1P05305 212 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 TRIM49P0CI25 452 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 TRIM49CP0CI26 452 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 PLS3P13797 630 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 CYP11B1P15538 503 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 GJA1P17302 382 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 PAX7P23759 505 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 PTPN4P29074 926 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 WEE1P30291 646 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 YWHABP31946 246 aaKnown RBP10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 PHBP35232 272 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 SLCO1A2P46721 670 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 CLCN2P51788 898 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 ITGA8P53708 1063 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 NCKAP1LP55160 1127 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 OCRLQ01968 901 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 KLC1Q07866 573 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 XKR9Q5GH70 373 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 FSTL4Q6MZW2 842 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 SYT13Q7L8C5 426 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 HAUS6Q7Z4H7 955 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 ELMOD1Q8N336 334 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 LRRC8CQ8TDW0 803 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 DENND1AQ8TEH3 1009 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 SLC20A1Q8WUM9 679 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 THOC1Q96FV9 657 aaKnown RBP10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 LRIG1Q96JA1 1093 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 UBL7Q96S82 380 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 LXNQ9BS40 222 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 LRRC3Q9BY71 257 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 FAM192AQ9GZU8 254 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 CYP4F11Q9HBI6 524 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 KIAA1586Q9HCI6 787 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms