RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PGAM1P18669 254 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 GCLCP48506 637 aaPredicted RBP8□□□□□ -1.13
BRCA1-221ENST00000493795 EPHB3P54753 998 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 UGT2B15P54855 530 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 TNK2Q07912 1038 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 MYBPC3Q14896 1274 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 SUZ12Q15022 739 aaKnown RBP8□□□□□ -1.13
BRCA1-221ENST00000493795 ALX1Q15699 326 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 SLC15A2Q16348 729 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF772Q68DY9 489 aaPredicted RBP8□□□□□ -1.13
BRCA1-221ENST00000493795 ILDR2Q71H61 639 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF540Q8NDQ6 660 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 PI4K2AQ9BTU6 479 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 TEX13BQ9BXU2 312 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 CDC42EP4Q9H3Q1 356 aaKnown RBP8□□□□□ -1.13
BRCA1-221ENST00000493795 PTPRHQ9HD43 1115 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 INTS7Q9NVH2 962 aaKnown RBP8□□□□□ -1.13
BRCA1-221ENST00000493795 ZMYM5Q9UJ78 669 aa8□□□□□ -1.13
BRCA1-221ENST00000493795 H7C1W4 665 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 HOXA2O43364 376 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 CKMP06732 381 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ACO1P21399 889 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 HMGCS2P54868 508 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 MTMR2Q13614 643 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 PREPLQ4J6C6 727 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 SUSD4Q5VX71 490 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 DNAJC14Q6Y2X3 702 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 RD3Q7Z3Z2 195 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 BHLHE22Q8NFJ8 381 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 REXO5Q96IC2 774 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 PANX3Q96QZ0 392 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 CDRT15Q96T59 188 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF184Q99676 751 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 RMI1Q9H9A7 625 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 VPS45Q9NRW7 570 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 TAS2R13Q9NYV9 303 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 C15orf41Q9Y2V0 281 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 C17orf102A2RUQ5 167 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 TPD52L2O43399 206 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 KLRC1P26715 233 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 BMPR2Q13873 1038 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 BOP1Q14137 746 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 SAPCD2Q86UD0 394 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ATCAYQ86WG3 371 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 FATE1Q969F0 183 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 APOPT1Q96IL0 206 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ITCHQ96J02 903 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 YME1L1Q96TA2 773 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 AIFM2Q9BRQ8 373 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 CIPCQ9C0C6 399 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 CST11Q9H112 138 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 EHD1Q9H4M9 534 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ATPIF1Q9UII2 106 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 TMCO1Q9UM00 188 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 CLEC4AQ9UMR7 237 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 SYNPO2Q9UMS6 1093 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 SLC12A8A0AV02 714 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 MCIDASD6RGH6 385 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 PAX7P23759 505 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 PRDX5P30044 214 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 MNDAP41218 407 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 FXR1P51114 621 aaKnown RBP eCLIP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 POU5F1Q01860 360 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 FMR1Q06787 632 aaKnown RBP eCLIP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 EFEMP1Q12805 493 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 NAB1Q13506 487 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 EPC2Q52LR7 807 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 SPOCD1Q6ZMY3 1216 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 SNX32Q86XE0 403 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 COLGALT1Q8NBJ5 622 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 TEX47Q8TBZ9 253 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 FAIM2Q9BWQ8 316 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 WDR12Q9GZL7 423 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 POMKQ9H5K3 350 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ZFYVE28Q9HCC9 887 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF224Q9NZL3 707 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 RAPGEFL1Q9UHV5 662 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ANKDD1BA6NHY2 528 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 RBAK-RBAKDNI3L0D1 243 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 SGTAO43765 313 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 GATBO75879 557 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 OR7A10O76100 309 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 IFNA16P05015 189 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 BMP7P18075 431 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 S100A2P29034 98 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 BCAT1P54687 386 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 MCL1Q07820 350 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ACSM2AQ08AH3 577 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 CDH17Q12864 832 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 RIPK1Q13546 671 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ZC2HC1CQ53FD0 456 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ACSM2BQ68CK6 577 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ERICH5Q6P6B1 374 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 RAD9BQ6WBX8 426 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 RNF19BQ6ZMZ0 732 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 RBM43Q6ZSC3 357 aaKnown RBP7.99□□□□□ -1.13
BRCA1-221ENST00000493795 BRSK2Q8IWQ3 736 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 CCDC54Q8NEL0 328 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 FBXO30Q8TB52 745 aa7.99□□□□□ -1.13
BRCA1-221ENST00000493795 ATG4AQ8WYN0 398 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms