RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TCP10LQ8TDR4 215 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 FNIP1Q8TF40 1166 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 C1orf54Q8WWF1 131 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 ART4Q93070 314 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 PHF21AQ96BD5 680 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 SIPA1Q96FS4 1042 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF347Q96SE7 839 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 KCNK16Q96T55 309 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 ABCG4Q9H172 646 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 EPS8L2Q9H6S3 715 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 ERVMER34-1Q9H9K5 563 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 KANSL3Q9P2N6 904 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 SERPINB13Q9UIV8 391 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 RNF112Q9ULX5 631 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 SNX13Q9Y5W8 968 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 A0A1W2PPM1 405 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 RBAK-RBAKDNI3L0D1 243 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 I3L521 148 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 PLK4O00444 970 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 SULT1B1O43704 296 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 SNAP91O60641 907 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 JRKO75564 520 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 RFPL2O75678 378 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 CD9P21926 228 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 TTKP33981 857 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 IDUAP35475 653 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 MSX2P35548 267 aaPredicted RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 AQP5P55064 265 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 PPP4CP60510 307 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 GPLD1P80108 840 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 KCNC4Q03721 635 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 NFATC3Q12968 1075 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 AP3B2Q13367 1082 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 MTM1Q13496 603 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 POU6F1Q14863 301 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 PAGE2BQ5JRK9 111 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 PIK3AP1Q6ZUJ8 805 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 CYFIP1Q7L576 1253 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 HORMAD1Q86X24 394 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 LRRC57Q8N9N7 239 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 ADCY4Q8NFM4 1077 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 BPIFB6Q8NFQ5 453 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 TGFBRAP1Q8WUH2 860 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 PPP1R16BQ96T49 567 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 TTYH2Q9BSA4 534 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 ARMT1Q9H993 441 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 IL17RBQ9NRM6 502 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 HOMER2Q9NSB8 354 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 CYB5R1Q9UHQ9 305 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 CDH22Q9UJ99 828 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 NAGPAQ9UK23 515 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 MAN2B2Q9Y2E5 1009 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 PCDHB4Q9Y5E5 795 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 RGS5O15539 181 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 DYNC1LI2O43237 492 aaPredicted RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 CPNE3O75131 537 aaKnown RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 CLEC2LP0C7M8 214 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 RFC4P35249 363 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 COILP38432 576 aaPredicted RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 BFSP1Q12934 665 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 SQLEQ14534 574 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 HERC3Q15034 1050 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 IL17AQ16552 155 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 NDUFAF5Q5TEU4 345 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 CNNM4Q6P4Q7 775 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 ARSKQ6UWY0 536 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 KCNK18Q7Z418 384 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 THNSL1Q8IYQ7 743 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 KIAA1958Q8N8K9 716 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 TRAF3IP1Q8TDR0 691 aaPredicted RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 LRRC15Q8TF66 581 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 CNPY3Q9BT09 278 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 TDRD1Q9BXT4 1180 aaKnown RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 GHITMQ9H3K2 345 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 XPNPEP1Q9NQW7 623 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 STAU2Q9NUL3 570 aaKnown RBP eCLIP7□□□□□ -1.29
VPS13B-205ENST00000493587 TMLHEQ9NVH6 421 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 NUP50Q9UKX7 468 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 ZHX2Q9Y6X8 837 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 H3BNH8 94 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 SLC9A3R1O14745 358 aaPredicted RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 ZMPSTE24O75844 475 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 ZBTB7AO95365 584 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 DLATP10515 647 aaKnown RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 PSKH1P11801 424 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 ACTN1P12814 892 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 POU2F1P14859 743 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 MMP8P22894 467 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 GSTM2P28161 218 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 RPL35P42766 123 aaKnown RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 ADGRE1Q14246 886 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 LYSMD3Q7Z3D4 306 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 ADCK1Q86TW2 530 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 ZSCAN29Q8IWY8 852 aaPredicted RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 RNF148Q8N7C7 305 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 PRELID2Q8N945 189 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 RBM14Q96PK6 669 aaKnown RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 EDEM3Q9BZQ6 932 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 SAV1Q9H4B6 383 aaPredicted RBP7□□□□□ -1.29
VPS13B-205ENST00000493587 PARVAQ9NVD7 372 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms