RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 IGSF8Q969P0 613 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 BTBD6Q96KE9 485 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 CCDC114Q96M63 670 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 SPON2Q9BUD6 331 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 MAK16Q9BXY0 300 aaKnown RBP8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 FAM126AQ9BYI3 521 aaPredicted RBP8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 TSGA10Q9BZW7 698 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 ATP13A1Q9HD20 1204 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 OSGEPQ9NPF4 335 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 TMPRSS4Q9NRS4 437 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 RAB23Q9ULC3 237 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 STARD13Q9Y3M8 1113 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 SNX10Q9Y5X0 201 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 NUP205Q92621 2012 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 A0A0A6YYK5 440 aaPredicted RBP8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 TCRBV21S2A2A0A5A6 115 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 ILVBLA1L0T0 632 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 DRGXA6NNA5 263 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 PRRT4C9JH25 899 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 CBX4O00257 560 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 KRT86O43790 486 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 RAMP2O60895 175 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 CNTN5O94779 1100 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 LRIG2O94898 1065 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 LCA5LO95447 670 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 SRPRAP08240 638 aaKnown RBP8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 HNRNPLP14866 589 aaKnown RBP eCLIP8.35□□□□□ -1.077e-10■■■□□ 19.1
TM4SF1-204ENST00000493348 COL9A1P20849 921 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 MAN1A1P33908 653 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 SERPINB6P35237 376 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 CETN2P41208 172 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 RECQLP46063 649 aaPredicted RBP8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 VAV2P52735 878 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 CDH6P55285 790 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 SATB1Q01826 763 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 ZNF234Q14588 700 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 POLD3Q15054 466 aaPredicted RBP8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 ZNF528Q3MIS6 628 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 C5orf22Q49AR2 442 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 RAB6CQ53S08 254 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 KCNT1Q5JUK3 1230 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 EMC10Q5UCC4 262 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 HEATR6Q6AI08 1181 aaKnown RBP8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 RETSATQ6NUM9 610 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 DAAM2Q86T65 1068 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 SYCE1Q8N0S2 351 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 PYROXD2Q8N2H3 581 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 PHTF2Q8N3S3 785 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 IL17RCQ8NAC3 791 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 CYB5D2Q8WUJ1 264 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 NSMCE1Q8WV22 266 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 TEKT4Q8WW24 435 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 SPACA7Q96KW9 195 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 HHIPQ96QV1 700 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 SNRNP25Q9BV90 132 aaKnown RBP8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 CALN1Q9BXU9 219 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 ADAM33Q9BZ11 813 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 TRIM7Q9C029 511 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 RAB6CQ9H0N0 254 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 MAGEH1Q9H213 219 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 FBRSQ9HAH7 460 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 GPATCH2LQ9NWQ4 482 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 CACNA2D2Q9NY47 1150 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 DDX56Q9NY93 547 aaKnown RBP8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 DLGAP2Q9P1A6 1054 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 THAP10Q9P2Z0 257 aaPredicted RBP8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 DNAI1Q9UI46 699 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 CLEC4EQ9ULY5 219 aa8.35□□□□□ -1.07
TM4SF1-204ENST00000493348 SHROOM3Q8TF72 1996 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 IGLV3-10A0A075B6K4 115 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ZSCAN5CA6NGD5 496 aaPredicted RBP8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ARHGAP42A6NI28 874 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 SHISA7A6NL88 538 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 H0Y858 1186 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 BUB1O43683 1085 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 NEBLO76041 1014 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 CCDC175P0C221 793 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 FECHP22830 423 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 KIR2DL1P43626 348 aaPredicted RBP8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 GNA12Q03113 381 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ZNF252P-AS1Q0IIN9 211 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 FZD5Q13467 585 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 PDK2Q15119 407 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 CRY1Q16526 586 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 FUT11Q495W5 492 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 USP39Q53GS9 565 aaKnown RBP8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ALFQ53S48 1182 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 FSCBQ5H9T9 825 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ANO7Q6IWH7 933 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 TMCO3Q6UWJ1 677 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 KIAA1324Q6UXG2 1013 aaKnown RBP8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 RAD9BQ6WBX8 426 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 RFX8Q6ZV50 586 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 CEP68Q76N32 757 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 DSG4Q86SJ6 1040 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 METTL3Q86U44 580 aaKnown RBP8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ADIPOR2Q86V24 386 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms