RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 CUTAO60888 179 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 TNFSF15O95150 251 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 LATS1O95835 1130 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 CD58P19256 250 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 TGM2P21980 687 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 MZF1P28698 734 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-222ENST00000491867 DRD3P35462 400 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 DUSP3P51452 185 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-222ENST00000491867 DLG4P78352 724 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 KCNMA1Q12791 1236 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 ZACNQ401N2 412 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 SHC4Q6S5L8 630 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 UNC13DQ70J99 1090 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 PIGZQ86VD9 579 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 C12orf56Q8IXR9 622 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 ARL14Q8N4G2 192 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 KDM1BQ8NB78 822 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 FIBINQ8TAL6 211 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 RNF139Q8WU17 664 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 GRAMD1AQ96CP6 724 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 SGF29Q96ES7 293 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 ZNF396Q96N95 335 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-222ENST00000491867 MAGEF1Q9HAY2 307 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 OLA1Q9NTK5 396 aaKnown RBP14.34□□□□□ -0.11
ATG4B-222ENST00000491867 EVA1BQ9NVM1 165 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 NLGN3Q9NZ94 848 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 TFIP11Q9UBB9 837 aaKnown RBP14.34□□□□□ -0.11
ATG4B-222ENST00000491867 ENTPD2Q9Y5L3 495 aa14.34□□□□□ -0.11
ATG4B-222ENST00000491867 K7ESM1 405 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 PIAS2O75928 621 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 GJB6O95452 261 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 YEATS4O95619 227 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 ZBED1O96006 694 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 HLA-DRAP01903 254 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 ITGB2P05107 769 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 THEGLP0DJG4 465 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 CR2P20023 1033 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 PIK3CAP42336 1068 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 TKTL1P51854 596 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 C4orf17Q53FE4 359 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 SETMARQ53H47 684 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-222ENST00000491867 RAB41Q5JT25 222 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 MMS22LQ6ZRQ5 1243 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 SV2AQ7L0J3 742 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 BHLHA9Q7RTU4 235 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 CLEC14AQ86T13 490 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 TRIM69Q86WT6 500 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 ZNF557Q8N988 423 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-222ENST00000491867 EDEM1Q92611 657 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 ARRDC3Q96B67 414 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 HEXIM2Q96MH2 286 aaKnown RBP14.33□□□□□ -0.12
ATG4B-222ENST00000491867 MYOCQ99972 504 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 ULBP1Q9BZM6 244 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 USP29Q9HBJ7 922 aa14.33□□□□□ -0.12
ATG4B-222ENST00000491867 CGNQ9P2M7 1197 aaKnown RBP14.33□□□□□ -0.12
ATG4B-222ENST00000491867 CPED1A4D0V7 1026 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 NEBLO76041 1014 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 SRPRAP08240 638 aaKnown RBP14.32□□□□□ -0.12
ATG4B-222ENST00000491867 SFTPCP11686 197 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 CASP1P29466 404 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 SLC6A4P31645 630 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 CDKN3Q16667 212 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 ZNF394Q53GI3 561 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 FAM133BQ5BKY9 247 aaKnown RBP14.32□□□□□ -0.12
ATG4B-222ENST00000491867 PM20D1Q6GTS8 502 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 RBM44Q6ZP01 1051 aaKnown RBP14.32□□□□□ -0.12
ATG4B-222ENST00000491867 PTPRN2Q92932 1015 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 RPL10LQ96L21 214 aaKnown RBP14.32□□□□□ -0.12
ATG4B-222ENST00000491867 SEMA3CQ99985 751 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 UBXN6Q9BZV1 441 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 KDM4CQ9H3R0 1056 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 CYP3A43Q9HB55 503 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 APOBEC3GQ9HC16 384 aaKnown RBP14.32□□□□□ -0.12
ATG4B-222ENST00000491867 CEP83Q9Y592 693 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 ITIH6Q6UXX5 1313 aa14.32□□□□□ -0.12
ATG4B-222ENST00000491867 NEMP2A6NFY4 417 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 SCAMP1O15126 338 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 SLC31A1O15431 190 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 POLR2DO15514 142 aaKnown RBP14.31□□□□□ -0.12
ATG4B-222ENST00000491867 IRAK2O43187 625 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 SLC7A4O43246 635 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 PLRG1O43660 514 aaKnown RBP14.31□□□□□ -0.12
ATG4B-222ENST00000491867 VAV1P15498 845 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 PRLRP16471 622 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 MLLT3P42568 568 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-222ENST00000491867 SLC11A2P49281 568 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 INHBCP55103 352 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 RPS24P62847 133 aaKnown RBP14.31□□□□□ -0.12
ATG4B-222ENST00000491867 ECT2LQ008S8 904 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 SRSF6Q13247 344 aaKnown RBP14.31□□□□□ -0.12
ATG4B-222ENST00000491867 CDH18Q13634 790 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 ELAVL3Q14576 367 aaKnown RBP14.31□□□□□ -0.12
ATG4B-222ENST00000491867 KNOP1Q1ED39 458 aaKnown RBP14.31□□□□□ -0.12
ATG4B-222ENST00000491867 ZNF542PQ5EBM4 170 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 FSCBQ5H9T9 825 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 PITRM1Q5JRX3 1037 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 RNF219Q5W0B1 726 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-222ENST00000491867 BSPRYQ5W0U4 402 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 GUSBP11Q6P575 273 aa14.31□□□□□ -0.12
ATG4B-222ENST00000491867 EFL1Q7Z2Z2 1120 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms