RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PPP2CAP67775 309 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 BEND5Q7L4P6 421 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 EID2Q8N6I1 236 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 EHBP1Q8NDI1 1231 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 BTN2A3PQ96KV6 586 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 SLC4A5Q9BY07 1137 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 TJP2Q9UDY2 1190 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 CNTN6Q9UQ52 1028 aa16.39■□□□□ 0.21
PLOD3-216ENST00000489927 TP53BP1Q12888 1972 aaPredicted RBP16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TBC1D3DA0A087WVF3 549 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TBC1D3IA0A087WXS9 549 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TBC1D3EA0A087X179 549 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TBC1D3KA0A087X1G2 549 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TBC1D3FA6NER0 549 aaPredicted RBP16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TBC1D3LB9A6J9 549 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 E5RJQ4 531 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 E9PAM4 449 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TLR4O00206 839 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 RFPL3O75679 317 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TRUB2O95900 331 aaKnown RBP16.38■□□□□ 0.21
PLOD3-216ENST00000489927 IGLV3-25P01717 112 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TBC1D3HP0C7X1 549 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 KRT5P13647 590 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 DRD3P35462 400 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 ACADSBP45954 432 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 ARRB1P49407 418 aaPredicted RBP16.38■□□□□ 0.21
PLOD3-216ENST00000489927 METAP1P53582 386 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 NXPH1P58417 271 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 PITX1P78337 314 aaPredicted RBP16.38■□□□□ 0.21
PLOD3-216ENST00000489927 NUCB2P80303 420 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 ELAVL3Q14576 367 aaKnown RBP16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TBC1D3GQ6DHY5 549 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TBC1D3CQ6IPX1 549 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 KLHL10Q6JEL2 608 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TTI2Q6NXR4 508 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 CIR1Q86X95 450 aaPredicted RBP16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TBC1D3Q8IZP1 549 aaPredicted RBP16.38■□□□□ 0.21
PLOD3-216ENST00000489927 STK32AQ8WU08 396 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TIGD1Q96MW7 591 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 DCBLD2Q96PD2 775 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 TRIM62Q9BVG3 475 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 POPDC2Q9HBU9 364 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 CYTH4Q9UIA0 394 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 MAN1B1Q9UKM7 699 aa16.38■□□□□ 0.21
PLOD3-216ENST00000489927 KCNU1A8MYU2 1149 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 F5H5T6 163 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 YKT6O15498 198 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 LATO43561 262 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 C1SP09871 688 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 JUPP14923 745 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 PDGFRAP16234 1089 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 HNF1BP35680 557 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 NNMTP40261 264 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 ACADVLP49748 655 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 YWHAZP63104 245 aaKnown RBP16.37■□□□□ 0.21
PLOD3-216ENST00000489927 KCNH2Q12809 1159 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 BNIP3Q12983 259 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 EIF4EBP2Q13542 120 aaPredicted RBP16.37■□□□□ 0.21
PLOD3-216ENST00000489927 TAF5Q15542 800 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.37■□□□□ 0.21
PLOD3-216ENST00000489927 CCAR2Q8N163 923 aaKnown RBP16.37■□□□□ 0.21
PLOD3-216ENST00000489927 SPAG5Q96R06 1193 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 PRMT1Q99873 361 aaKnown RBP16.37■□□□□ 0.21
PLOD3-216ENST00000489927 INTS2Q9H0H0 1204 aaKnown RBP16.37■□□□□ 0.21
PLOD3-216ENST00000489927 ACP6Q9NPH0 428 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 ARHGAP20Q9P2F6 1191 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 HOOK1Q9UJC3 728 aaKnown RBP16.37■□□□□ 0.21
PLOD3-216ENST00000489927 TPX2Q9ULW0 747 aaKnown RBP16.37■□□□□ 0.21
PLOD3-216ENST00000489927 BPTFQ12830 3046 aa16.37■□□□□ 0.21
PLOD3-216ENST00000489927 URB1O60287 2271 aaKnown RBP16.36■□□□□ 0.21
PLOD3-216ENST00000489927 NYNRINQ9P2P1 1898 aaKnown RBP16.36■□□□□ 0.21
PLOD3-216ENST00000489927 GOLGA4Q13439 2230 aaKnown RBP16.36■□□□□ 0.21
PLOD3-216ENST00000489927 PPP1R3GB7ZBB8 358 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 RTN2O75298 545 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 LETM1O95202 739 aaPredicted RBP16.36■□□□□ 0.21
PLOD3-216ENST00000489927 CDK4P11802 303 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 BMP6P22004 513 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 PPP1R2P41236 205 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 SLC12A1Q13621 1099 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 MEA1Q16626 185 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 SLC45A4Q5BKX6 768 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 C6orf118Q5T5N4 469 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 SFMBT2Q5VUG0 894 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 NAPEPLDQ6IQ20 393 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 CXorf57Q6NSI4 855 aaKnown RBP16.36■□□□□ 0.21
PLOD3-216ENST00000489927 TMEM110Q86TL2 294 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 SPATS2Q86XZ4 545 aaKnown RBP16.36■□□□□ 0.21
PLOD3-216ENST00000489927 TRIM59Q8IWR1 403 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 FRS2Q8WU20 508 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 NELFBQ8WX92 580 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 ZNF606Q8WXB4 792 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 TSC1Q92574 1164 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 FAM131CQ96AQ9 280 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 NXPE2Q96DL1 559 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 MED15Q96RN5 788 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 THAP9Q9H5L6 903 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 ERVMER34-1Q9H9K5 563 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.36■□□□□ 0.21
PLOD3-216ENST00000489927 SARDHQ9UL12 918 aa16.36■□□□□ 0.21
PLOD3-216ENST00000489927 GCN1Q92616 2671 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms