RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	HNF1B	P35680	557 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	EIF2S3	P41091	472 aa	Known RBP	11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	PRCP	P42785	496 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	ADPRH	P54922	357 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	NXPH1	P58417	271 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	KRT85	P78386	507 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	CNGA2	Q16280	664 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	DCAF6	Q58WW2	860 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	SWT1	Q5T5J6	900 aa	Known RBP	11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	HES3	Q5TGS1	186 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	SFMBT2	Q5VUG0	894 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	FBXL19	Q6PCT2	694 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	TMEM270	Q6UE05	265 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	KANSL1	Q7Z3B3	1105 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	HSCB	Q8IWL3	235 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	APCDD1	Q8J025	514 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	CFAP52	Q8N1V2	620 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	STK40	Q8N2I9	435 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	CARNMT1	Q8N4J0	409 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	EID2	Q8N6I1	236 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	PTPRN2	Q92932	1015 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	KAT5	Q92993	513 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	NXPE2	Q96DL1	559 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	UBL7	Q96S82	380 aa	Predicted RBP	11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	OMD	Q99983	421 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	PRORY	Q9H606	182 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	GDF3	Q9NR23	364 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	XPO7	Q9UIA9	1087 aa	Known RBP	11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	SLCO3A1	Q9UIG8	710 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	TLR6	Q9Y2C9	796 aa		11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	SETX	Q7Z333	2677 aa	Known RBP	11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.75	□□□□□ -0.53
SNU13-208	ENST00000488571	DOCK9	Q9BZ29	2069 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	PTPRQ	Q9UMZ3	2332 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	EDDM13	A0A1B0GTR0	161 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571		A0A1W2PQ27	194 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571		A0A1W2PQ64	194 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	EIF4E1B	A6NMX2	242 aa	Known RBP	11.74	□□□□□ -0.53
SNU13-208	ENST00000488571		M0QYV0	167 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	TLR4	O00206	839 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	YKT6	O15498	198 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	LAT	O43561	262 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	LUC7L3	O95232	432 aa	Known RBP	11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	CDK4	P11802	303 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	GOT1	P17174	413 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	TBXAS1	P24557	533 aa	Predicted RBP	11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	BRD2	P25440	801 aa	Known RBP	11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	DRD3	P35462	400 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	PSMD8	P48556	350 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	METAP1	P53582	386 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	PPP2CB	P62714	309 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	PPP2CA	P67775	309 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	ECT2L	Q008S8	904 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	SEMG2	Q02383	582 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	SFSWAP	Q12872	951 aa	Known RBP	11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	BNIP3	Q12983	259 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	NNT	Q13423	1086 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	PNOC	Q13519	176 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	CDH18	Q13634	790 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	RTP5	Q14D33	572 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	COBLL1	Q53SF7	1204 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	C6orf118	Q5T5N4	469 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	ANKRD40	Q6AI12	368 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	SPATS2	Q86XZ4	545 aa	Known RBP	11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	OR14C36	Q8NHC7	312 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	FAM131C	Q96AQ9	280 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	SKA1	Q96BD8	255 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	SERAC1	Q96JX3	654 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	RPL10L	Q96L21	214 aa	Known RBP	11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	HSFY1	Q96LI6	401 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	SERPINB11	Q96P15	392 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	NAALADL1	Q9UQQ1	740 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	RAI2	Q9Y5P3	530 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	KALRN	O60229	2985 aa		11.74	□□□□□ -0.53
SNU13-208	ENST00000488571	TYW5	A2RUC4	315 aa	Known RBP	11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	TRIM49B	A6NDI0	452 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	FBXO21	O94952	628 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	MOCS2	O96007	188 aa	Predicted RBP	11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	ADH1B	P00325	375 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	PRKCSH	P14314	528 aa	Predicted RBP	11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	VAV1	P15498	845 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	C5AR1	P21730	350 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	MZF1	P28698	734 aa	Predicted RBP	11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	RXRG	P48443	463 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	RPL34	P49207	117 aa	Known RBP	11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	STK19	P49842	368 aa	Predicted RBP	11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	FKBP3	Q00688	224 aa	Known RBP	11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	SYPL2	Q5VXT5	272 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	TAC4	Q86UU9	113 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	LMO3	Q8TAP4	145 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	DDX50	Q9BQ39	737 aa	Known RBP	11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	NRSN2	Q9GZP1	204 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	MIS12	Q9H081	205 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	ERVMER34-1	Q9H9K5	563 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	ARHGAP20	Q9P2F6	1191 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	PCDHB4	Q9Y5E5	795 aa		11.73	□□□□□ -0.53
SNU13-208	ENST00000488571	ATXN7	O15265	892 aa	Predicted RBP	11.72	□□□□□ -0.53

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