RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SFPQP23246 707 aaKnown RBP eCLIP4.85□□□□□ -1.63
ITGB1-214ENST00000488427 KLRK1P26718 216 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 LAMB3Q13751 1172 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 TRIM14Q14142 442 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 TWIST1Q15672 202 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 C10orf25Q5T742 122 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 SHC4Q6S5L8 630 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 C16orf89Q6UX73 402 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 ADGRF4Q8IZF3 695 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 CACNA2D3Q8IZS8 1091 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 OR4N4Q8N0Y3 316 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 ENDOVQ8N8Q3 282 aaKnown RBP4.85□□□□□ -1.63
ITGB1-214ENST00000488427 TRAPPC12Q8WVT3 735 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 CCT6BQ92526 530 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 C3orf49Q96BT1 292 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 CLMNQ96JQ2 1002 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 PIGSQ96S52 555 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 MLXIPQ9HAP2 919 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 SEPSECSQ9HD40 501 aaKnown RBP4.85□□□□□ -1.63
ITGB1-214ENST00000488427 TMEM45AQ9NWC5 275 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 TRPC5Q9UL62 973 aaPredicted RBP4.85□□□□□ -1.63
ITGB1-214ENST00000488427 SLC12A4Q9UP95 1085 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 TNFSF13BQ9Y275 285 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 MSH6P52701 1360 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 ABCC3O15438 1527 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 PDE4DIPQ5VU43 2346 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 TNRQ92752 1358 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 CYP3A7-CYP3A51PA0A087WV96 503 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 C2CD4BA6NLJ0 364 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 KIF28PB7ZC32 967 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 SOCS2O14508 198 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 RRHO14718 337 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 PPEF2O14830 753 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 CCNT1O60563 726 aaKnown RBP4.84□□□□□ -1.63
ITGB1-214ENST00000488427 TLR2O60603 784 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 PPP6R2O75170 966 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 CNOT3O75175 753 aaKnown RBP4.84□□□□□ -1.63
ITGB1-214ENST00000488427 CNTN5O94779 1100 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 LCKP06239 509 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 IGFBP2P18065 325 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 CYP3A7P24462 503 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 SERPINA4P29622 427 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 RPL15P61313 204 aaKnown RBP4.84□□□□□ -1.63
ITGB1-214ENST00000488427 DLGAP5Q15398 846 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 SEC23BQ15437 767 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 EARS2Q5JPH6 523 aaKnown RBP4.84□□□□□ -1.63
ITGB1-214ENST00000488427 TANGO2Q6ICL3 276 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 CYB5R4Q7L1T6 521 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 RFX6Q8HWS3 928 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 SPATA5Q8NB90 893 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 COQ8BQ96D53 544 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 TRMT61AQ96FX7 289 aaKnown RBP4.84□□□□□ -1.63
ITGB1-214ENST00000488427 TM2D2Q9BX73 214 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 AGO4Q9HCK5 861 aaKnown RBP4.84□□□□□ -1.63
ITGB1-214ENST00000488427 PRDM8Q9NQV8 689 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 B3GNT3Q9Y2A9 372 aa4.84□□□□□ -1.63
ITGB1-214ENST00000488427 SHANK3Q9BYB0 1731 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 MARF1Q9Y4F3 1742 aaKnown RBP4.83□□□□□ -1.64
ITGB1-214ENST00000488427 ARHGAP23Q9P227 1491 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 TMEM247A6NEH6 219 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 SLC38A8A6NNN8 435 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 INO80B-WBP1J3KQ70 363 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 TRIM38O00635 465 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 TP73O15350 636 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 IRAK2O43187 625 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 MOSPD3O75425 235 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 TNFRSF6BO95407 300 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 BMP15O95972 392 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 ST6GAL1P15907 406 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 HOXA7P31268 230 aaPredicted RBP4.83□□□□□ -1.64
ITGB1-214ENST00000488427 IDUAP35475 653 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 GRK6P43250 576 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 ME1P48163 572 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 SLC37A1P57057 533 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 B4GALNT1Q00973 533 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 PRKG1Q13976 671 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 BTBD16Q32M84 506 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 GRAMD1BQ3KR37 738 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 ADCK5Q3MIX3 580 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 C10orf76Q5T2E6 689 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 DGAT2L7PQ6IED9 249 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 RHPN2Q8IUC4 686 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 AFAP1Q8N556 730 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 SLC44A5Q8NCS7 719 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 OR52N4Q8NGI2 321 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 OR6Y1Q8NGX8 325 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 CENPIQ92674 756 aaPredicted RBP4.83□□□□□ -1.64
ITGB1-214ENST00000488427 SDCCAG3Q96C92 435 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 SLC39A13Q96H72 371 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 ZFYVE19Q96K21 471 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 GPR78Q96P69 363 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 FCRL4Q96PJ5 515 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 TRAPPC9Q96Q05 1148 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 PABPC3Q9H361 631 aaKnown RBP4.83□□□□□ -1.64
ITGB1-214ENST00000488427 TASP1Q9H6P5 420 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 RAB21Q9UL25 225 aa4.83□□□□□ -1.64
ITGB1-214ENST00000488427 RALGAPBQ86X10 1494 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 NLRP1Q9C000 1473 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 ATRNO75882 1429 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 SLC22A23A1A5C7 686 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms