RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 ERVW-1Q9UQF0 538 aa12.62□□□□□ -0.39
OPTN-212ENST00000487935 CHD6Q8TD26 2715 aa12.62□□□□□ -0.39
OPTN-212ENST00000487935 NUMA1Q14980 2115 aa12.62□□□□□ -0.39
OPTN-212ENST00000487935 PLXNB3Q9ULL4 1909 aa12.62□□□□□ -0.39
OPTN-212ENST00000487935 FREM2Q5SZK8 3169 aa12.62□□□□□ -0.39
OPTN-212ENST00000487935 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
OPTN-212ENST00000487935 FAM47DPA6NHR8 397 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 KCNK3O14649 394 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 EPHB6O15197 1021 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 MED7O43513 233 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 DFNA5O60443 496 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 LUC7L3O95232 432 aaKnown RBP12.61□□□□□ -0.39
OPTN-212ENST00000487935 APOEP02649 317 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 SRPRAP08240 638 aaKnown RBP12.61□□□□□ -0.39
OPTN-212ENST00000487935 ATXN1LP0C7T5 689 aaKnown RBP12.61□□□□□ -0.39
OPTN-212ENST00000487935 GRK6P43250 576 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 POLR2FP61218 127 aaKnown RBP12.61□□□□□ -0.39
OPTN-212ENST00000487935 ARID5BQ14865 1188 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 CST6Q15828 149 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 DCAF6Q58WW2 860 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 FSCBQ5H9T9 825 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 PITRM1Q5JRX3 1037 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 SARM1Q6SZW1 724 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 LAYNQ6UX15 382 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 MMS22LQ6ZRQ5 1243 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 TMPRSS7Q7RTY8 843 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 TAC4Q86UU9 113 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 LGI2Q8N0V4 545 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 ADAM32Q8TC27 787 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 STK32AQ8WU08 396 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 SKA1Q96BD8 255 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 SPAG5Q96R06 1193 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 NLRC4Q9NPP4 1024 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 TOR4AQ9NXH8 423 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 TJP2Q9UDY2 1190 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 CNTN6Q9UQ52 1028 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 BTBD3Q9Y2F9 522 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 CEP83Q9Y592 693 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 PTPRBP23467 1997 aa12.61□□□□□ -0.39
OPTN-212ENST00000487935 EDDM13A0A1B0GTR0 161 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 A0A1W2PP55 124 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 A0A1W2PPC4 97 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 LRRC72A6NJI9 287 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 H0Y8X5 98 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 MID1O15344 667 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 TNFSF14O43557 240 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 PCDHGA12O60330 932 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 DKK1O94907 266 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 IGHV4-34P06331 123 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 TACR2P21452 398 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 CTSOP43234 321 aaPredicted RBP12.6□□□□□ -0.39
OPTN-212ENST00000487935 CTSKP43235 329 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 GALCP54803 685 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 C21orf59P57076 290 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 RACK1P63244 317 aaKnown RBP12.6□□□□□ -0.39
OPTN-212ENST00000487935 ECT2LQ008S8 904 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 DRAP1Q14919 205 aaPredicted RBP12.6□□□□□ -0.39
OPTN-212ENST00000487935 MEA1Q16626 185 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 INAVAQ3KP66 663 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 C9orf64Q5T6V5 341 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 SYPL2Q5VXT5 272 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 RNF219Q5W0B1 726 aaPredicted RBP12.6□□□□□ -0.39
OPTN-212ENST00000487935 RAP1GAP2Q684P5 730 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 DPY19L2P1Q6NXN4 242 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 DENND1BQ6P3S1 775 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 CHSY1Q86X52 802 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 MMAAQ8IVH4 418 aaKnown RBP12.6□□□□□ -0.39
OPTN-212ENST00000487935 GALNT15Q8N3T1 639 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 BTN2A3PQ96KV6 586 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 OMDQ99983 421 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 ORAI3Q9BRQ5 295 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 ACE2Q9BYF1 805 aaPredicted RBP12.6□□□□□ -0.39
OPTN-212ENST00000487935 NEUROG2Q9H2A3 272 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 POPDC2Q9HBU9 364 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 SERGEFQ9UGK8 458 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 XPO7Q9UIA9 1087 aaKnown RBP12.6□□□□□ -0.39
OPTN-212ENST00000487935 FZD4Q9ULV1 537 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 DAAM1Q9Y4D1 1078 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 ITIH6Q6UXX5 1313 aa12.6□□□□□ -0.39
OPTN-212ENST00000487935 PLXNA2O75051 1894 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 TTC34A8MYJ7 566 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 E5RJQ4 531 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 VILLO15195 856 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 PAPSS1O43252 624 aaPredicted RBP12.59□□□□□ -0.39
OPTN-212ENST00000487935 RNASEH2AO75792 299 aaKnown RBP12.59□□□□□ -0.39
OPTN-212ENST00000487935 PNMA6AP0CW24 399 aaPredicted RBP12.59□□□□□ -0.39
OPTN-212ENST00000487935 SLC8A1P32418 973 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 NNMTP40261 264 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 PBX1P40424 430 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 SLC12A1Q13621 1099 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 ZC3H12AQ5D1E8 599 aaKnown RBP12.59□□□□□ -0.39
OPTN-212ENST00000487935 KCNT1Q5JUK3 1230 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 NCEH1Q6PIU2 408 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 SND1Q7KZF4 910 aaKnown RBP eCLIP12.59□□□□□ -0.39
OPTN-212ENST00000487935 TMEM110Q86TL2 294 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 ATP6V0D2Q8N8Y2 350 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 OR2T34Q8NGX1 318 aa12.59□□□□□ -0.39
OPTN-212ENST00000487935 MDM1Q8TC05 714 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms