RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 RAPGEF1Q13905 1077 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 DRAP1Q14919 205 aaPredicted RBP25.31■■□□□ 1.64
LIME1-206ENST00000487026 TEAD4Q15561 434 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 KCNT1Q5JUK3 1230 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 KIAA0895LQ68EN5 471 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 CXorf57Q6NSI4 855 aaKnown RBP25.31■■□□□ 1.64
LIME1-206ENST00000487026 NCEH1Q6PIU2 408 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 C14orf80Q86SX3 495 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 VANGL2Q9ULK5 521 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 MSRB2Q9Y3D2 182 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 HS3ST4Q9Y661 456 aa25.31■■□□□ 1.64
LIME1-206ENST00000487026 SPEGQ15772 3267 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 A0A1B0GVM2 712 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 TCAF2A6NFQ2 919 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 M0QYT0 321 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 DAB1O75553 588 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 ZNF883P0CG24 379 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 ERCC5P28715 1186 aaPredicted RBP25.3■■□□□ 1.64
LIME1-206ENST00000487026 SLC12A1Q13621 1099 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 ZNF423Q2M1K9 1284 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 RAB44Q7Z6P3 723 aaPredicted RBP25.3■■□□□ 1.64
LIME1-206ENST00000487026 KDF1Q8NAX2 398 aaPredicted RBP25.3■■□□□ 1.64
LIME1-206ENST00000487026 OR52K2Q8NGK3 314 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 SIK2Q9H0K1 926 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 PDCL3Q9H2J4 239 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 EBF2Q9HAK2 575 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 OSGEPQ9NPF4 335 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 SAMSN1Q9NSI8 373 aaKnown RBP25.3■■□□□ 1.64
LIME1-206ENST00000487026 FHOD1Q9Y613 1164 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 CFAP47Q6ZTR5 3102 aa25.3■■□□□ 1.64
LIME1-206ENST00000487026 PAGE1O75459 146 aa25.29■■□□□ 1.64
LIME1-206ENST00000487026 TFE3P19532 575 aaPredicted RBP25.29■■□□□ 1.64
LIME1-206ENST00000487026 NOS2P35228 1153 aa25.29■■□□□ 1.64
LIME1-206ENST00000487026 GRIA4P48058 902 aa25.29■■□□□ 1.64
LIME1-206ENST00000487026 SNX16P57768 344 aa25.29■■□□□ 1.64
LIME1-206ENST00000487026 KLHDC7AQ5VTJ3 777 aa25.29■■□□□ 1.64
LIME1-206ENST00000487026 TTC39BQ5VTQ0 682 aaPredicted RBP25.29■■□□□ 1.64
LIME1-206ENST00000487026 OTUD1Q5VV17 481 aaPredicted RBP25.29■■□□□ 1.64
LIME1-206ENST00000487026 TAF3Q5VWG9 929 aa25.29■■□□□ 1.64
LIME1-206ENST00000487026 SLC26A9Q7LBE3 791 aa25.29■■□□□ 1.64
LIME1-206ENST00000487026 SLCO6A1Q86UG4 719 aa25.29■■□□□ 1.64
LIME1-206ENST00000487026 AADATQ8N5Z0 425 aa25.29■■□□□ 1.64
LIME1-206ENST00000487026 NUP62CLQ9H1M0 184 aa25.29■■□□□ 1.64
LIME1-206ENST00000487026 WDFY3Q8IZQ1 3526 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 IL1BP01584 269 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 NNMTP40261 264 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 PLK1P53350 603 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 BPIFB4P59827 614 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 SFSWAPQ12872 951 aaKnown RBP25.28■■□□□ 1.64
LIME1-206ENST00000487026 KCNJ12Q14500 433 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 DBX2Q6ZNG2 339 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 ADAT2Q7Z6V5 191 aaKnown RBP25.28■■□□□ 1.64
LIME1-206ENST00000487026 ZNF397Q8NF99 534 aaPredicted RBP25.28■■□□□ 1.64
LIME1-206ENST00000487026 RHBDD1Q8TEB9 315 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 ALG14Q96F25 216 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 FEM1AQ9BSK4 669 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 ANLNQ9NQW6 1124 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 PIGVQ9NUD9 493 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 ADAMTS1Q9UHI8 967 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 BTBD3Q9Y2F9 522 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 SNX10Q9Y5X0 201 aa25.28■■□□□ 1.64
LIME1-206ENST00000487026 CHD6Q8TD26 2715 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.27■■□□□ 1.64
LIME1-206ENST00000487026 ADCY5O95622 1261 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 CYP11B1P15538 503 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 METAP1P53582 386 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 SULT2A1Q06520 285 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 ZNF177Q13360 481 aaPredicted RBP25.27■■□□□ 1.64
LIME1-206ENST00000487026 C2CD6Q53TS8 623 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 TMEM35BQ8NCS4 154 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 FRS2Q8WU20 508 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 SLC6A18Q96N87 628 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 NPY6RQ99463 290 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.27■■□□□ 1.64
LIME1-206ENST00000487026 DACH1Q9UI36 760 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 PCDHGB2Q9Y5G2 931 aa25.27■■□□□ 1.64
LIME1-206ENST00000487026 A0A1W2PPC4 97 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 LRRC72A6NJI9 287 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 H0Y8X5 98 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 PLK4O00444 970 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 CNTN5O94779 1100 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 GOT1P17174 413 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 ACCSLQ4AC99 568 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 PRAMEF14Q5SWL7 426 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 SMYD5Q6GMV2 418 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.26■■□□□ 1.63
LIME1-206ENST00000487026 SND1Q7KZF4 910 aaKnown RBP eCLIP25.26■■□□□ 1.63
LIME1-206ENST00000487026 OR2T34Q8NGX1 318 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 OR14C36Q8NHC7 312 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 ADAMTS14Q8WXS8 1223 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 NAA15Q9BXJ9 866 aaKnown RBP25.26■■□□□ 1.63
LIME1-206ENST00000487026 TKTL2Q9H0I9 626 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 WDCPQ9H6R7 721 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 FZD4Q9ULV1 537 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 CABIN1Q9Y6J0 2220 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 TMEM131Q92545 1883 aa25.26■■□□□ 1.63
LIME1-206ENST00000487026 ZZEF1O43149 2961 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 FAM221BA6H8Z2 402 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 I6L893 689 aaPredicted RBP25.25■■□□□ 1.63
LIME1-206ENST00000487026 WNT9AO14904 365 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms