RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 CHKBQ9Y259 395 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 HIF3AQ9Y2N7 669 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 ATP6V1DQ9Y5K8 247 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 GPC6Q9Y625 555 aaPredicted RBP5.71□□□□□ -1.5
SF1-217ENST00000486960 SHROOM3Q8TF72 1996 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 DOPEY2Q9Y3R5 2298 aa5.71□□□□□ -1.5
SF1-217ENST00000486960 NF1P21359 2839 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 MED23Q9ULK4 1368 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ATAD5Q96QE3 1844 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 TRAV34A0A0B4J273 112 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 A8MV72 311 aaPredicted RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 E9PBE3 544 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 GOLGA8SH3BPF8 625 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 PODXLO00592 558 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 C2CD2LO14523 706 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 IFIT3O14879 490 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 CASC3O15234 703 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 GMFGO60234 142 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 KLHL18O94889 574 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 KRT14P02533 472 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ALBP02768 609 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 CYP2E1P05181 493 aaPredicted RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 ITGA2BP08514 1039 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ITGA5P08648 1049 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 RPSAP08865 295 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 BRAFP15056 766 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 HPGDP15428 266 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 PRKACBP22694 351 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ACAT1P24752 427 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 MCM7P33993 719 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ADD1P35611 737 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 LTBRP36941 435 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 GCLCP48506 637 aaPredicted RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 DHPSP49366 369 aaPredicted RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 GFRA1P56159 465 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 SLC8A3P57103 927 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 RAB1AP62820 205 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 SCN1BQ07699 218 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 DHX9Q08211 1270 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 TBC1D8BQ0IIM8 1120 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 LMAN2Q12907 356 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 CHIT1Q13231 466 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 PLD1Q13393 1074 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ITGA7Q13683 1181 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 TNFAIP1Q13829 316 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 GIT2Q14161 759 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 TRIM25Q14258 630 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 PDIA5Q14554 519 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 PDCD1Q15116 288 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 PDK1Q15118 436 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ZRSR1Q15695 479 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 PFKFB3Q16875 520 aaPredicted RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 TYSND1Q2T9J0 566 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 FUT11Q495W5 492 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 PAN2Q504Q3 1202 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 LRRC23Q53EV4 343 aaPredicted RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 TREML2Q5T2D2 321 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ERMARDQ5T6L9 678 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 HHATQ5VTY9 493 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ATG16L1Q676U5 607 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ETFRF1Q6IPR1 90 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 BORAQ6PGQ7 559 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 KLHDC10Q6PID8 442 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 TRAT1Q6PIZ9 186 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 FRMD7Q6ZUT3 714 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 MARK2Q7KZI7 788 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 TAOK1Q7L7X3 1001 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 VASH1Q7L8A9 365 aaPredicted RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 OTOAQ7RTW8 1153 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 MCEMP1Q8IX19 187 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 TMEFF1Q8IYR6 380 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ZNF295-AS1Q8N0V1 137 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 SCML4Q8N228 414 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 BBS5Q8N3I7 341 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 ZNF610Q8N9Z0 462 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 KDF1Q8NAX2 398 aaPredicted RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 POGLUT1Q8NBL1 392 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 OR6J1Q8NGC5 347 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 CACTINQ8WUQ7 758 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 PRCCQ92733 491 aaPredicted RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 SMARCE1Q969G3 411 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 SDCCAG3Q96C92 435 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 SPACA9Q96E40 222 aaPredicted RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 ERP44Q9BS26 406 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 LSG1Q9H089 658 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 KLHL25Q9H0H3 589 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 RNPEPQ9H4A4 650 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 IGFLR1Q9H665 355 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 TDRD3Q9H7E2 651 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 GORASP2Q9H8Y8 452 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 PSTPIP2Q9H939 334 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 A1CFQ9NQ94 594 aaKnown RBP5.7□□□□□ -1.5
SF1-217ENST00000486960 SERHLQ9NQF3 203 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 FAM114A2Q9NRY5 505 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 HCFC1R1Q9NWW0 138 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 TMOD2Q9NZR1 351 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 NDUFAF4Q9P032 175 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 EMC3Q9P0I2 261 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 AMACRQ9UHK6 382 aa5.7□□□□□ -1.5
SF1-217ENST00000486960 MAN2B2Q9Y2E5 1009 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms