RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 EDDM13A0A1B0GTR0 161 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 A0A1B0GTW7 788 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 CSRP1P21291 193 aaKnown RBP18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 MMP8P22894 467 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 GGCXP38435 758 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 CDH4P55283 916 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 CENPCQ03188 943 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 SFSWAPQ12872 951 aaKnown RBP18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 TTC31Q49AM3 519 aaPredicted RBP18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 ACBD5Q5T8D3 534 aaPredicted RBP18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 BNIPLQ7Z465 357 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 ALG14Q96F25 216 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 FEM1AQ9BSK4 669 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 SGK2Q9HBY8 427 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 NCKAP1Q9Y2A7 1128 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 TBC1D30Q9Y2I9 924 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 NCOR2Q9Y618 2525 aa18.96■□□□□ 0.63
PRPF40A-209ENST00000486100 CKAP5Q14008 2032 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 I6L893 689 aaPredicted RBP18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 CEACAM1P13688 526 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 VASPP50552 380 aaPredicted RBP18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 NOVA1P51513 510 aaKnown RBP18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 IRAK1P51617 712 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 SH3PXD2AQ5TCZ1 1133 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 TRNP1Q6NT89 227 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 PSAPL1Q6NUJ1 521 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 TRIM72Q6ZMU5 477 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 USP30Q70CQ3 517 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 AOPEPQ8N6M6 819 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 PTPRN2Q92932 1015 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 CFAP57Q96MR6 1250 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 FAM129BQ96TA1 746 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 MIR1-1HGQ9H1L0 117 aa18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 PABPC3Q9H361 631 aaKnown RBP18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 C6orf106Q9H6K1 298 aaPredicted RBP18.95■□□□□ 0.62
PRPF40A-209ENST00000486100 DRGXA6NNA5 263 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 BCAT2O15382 392 aaPredicted RBP18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 OPHN1O60890 802 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 ENDOD1O94919 500 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 SEMA4FO95754 770 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 UNGP13051 313 aaPredicted RBP18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 STK19P49842 368 aaPredicted RBP18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 CST6Q15828 149 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 ANO6Q4KMQ2 910 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 LRRC31Q6UY01 552 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 ZNF683Q8IZ20 524 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 HDDC3Q8N4P3 179 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 MINDY1Q8N5J2 469 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 OR52K2Q8NGK3 314 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 C1orf216Q8TAB5 229 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 SLC30A5Q8TAD4 765 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 HAPLN3Q96S86 360 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 PCDHB18PQ96TA0 734 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 BPIFA3Q9BQP9 254 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 ZDHHC5Q9C0B5 715 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 FBXL12Q9NXK8 326 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 EIF2B4Q9UI10 523 aaKnown RBP18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 OR51B4Q9Y5P0 310 aa18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 TNRC6BQ9UPQ9 1833 aaKnown RBP18.94■□□□□ 0.62
PRPF40A-209ENST00000486100 MUC22E2RYF6 1773 aaPredicted RBP18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 SMTNL1A8MU46 457 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 UPK3BL1B0FP48 263 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 UPK3BL2E5RIL1 263 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 GIPC1O14908 333 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 CNTN5O94779 1100 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 ATP1A3P13637 1013 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 SLC8A1P32418 973 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 RDXP35241 583 aaKnown RBP18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 NUMBP49757 651 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 SEMA3BQ13214 749 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 ALFQ53S48 1182 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 MMAAQ8IVH4 418 aaKnown RBP18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 STK40Q8N2I9 435 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 ZCCHC9Q8N567 271 aaKnown RBP18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 EMC1Q8N766 993 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 GANCQ8TET4 914 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 FRS2Q8WU20 508 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 C11orf70Q9BRQ4 267 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 METTL5Q9NRN9 209 aaKnown RBP18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 TMPRSS4Q9NRS4 437 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 DNAAF2Q9NVR5 837 aaKnown RBP18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 SNX10Q9Y5X0 201 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 SPTBN2O15020 2390 aa18.93■□□□□ 0.62
PRPF40A-209ENST00000486100 MID1O15344 667 aa18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 NSFP46459 744 aaKnown RBP18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 PTP4A2Q12974 167 aa18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 LRSAM1Q6UWE0 723 aa18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 PHLDB2Q86SQ0 1253 aa18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 SETD3Q86TU7 594 aaPredicted RBP18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 RXFP2Q8WXD0 754 aa18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 NEUROG2Q9H2A3 272 aa18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 SLC32A1Q9H598 525 aa18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 SLC25A13Q9UJS0 675 aa18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 VPS28Q9UK41 221 aa18.92■□□□□ 0.62
PRPF40A-209ENST00000486100 IGLV3-10A0A075B6K4 115 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 A0A1W2PP55 124 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 E9PAM4 449 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 ATP9BO43861 1147 aa18.91■□□□□ 0.62
PRPF40A-209ENST00000486100 RHOCP08134 193 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms