RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 SYCP1Q15431 976 aa23.41■■□□□ 1.34
CYTH3-208ENST00000482460 ARCQ7LC44 396 aa23.41■■□□□ 1.34
CYTH3-208ENST00000482460 C14orf80Q86SX3 495 aa23.41■■□□□ 1.34
CYTH3-208ENST00000482460 MINDY1Q8N5J2 469 aa23.41■■□□□ 1.34
CYTH3-208ENST00000482460 MIR1-1HGQ9H1L0 117 aa23.41■■□□□ 1.34
CYTH3-208ENST00000482460 TMEM59LQ9UK28 342 aa23.41■■□□□ 1.34
CYTH3-208ENST00000482460 PCNX2A6NKB5 2137 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 GOLGA8SH3BPF8 625 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 GIPC1O14908 333 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 OPHN1O60890 802 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 CLDN11O75508 207 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 ZNF18P17022 549 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 CHRNB2P17787 502 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 FLT3P36888 993 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 GGCXP38435 758 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 FMO1Q01740 532 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 SFSWAPQ12872 951 aaKnown RBP23.4■■□□□ 1.34
CYTH3-208ENST00000482460 NCAPHQ15003 741 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 USP30Q70CQ3 517 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 HDDC3Q8N4P3 179 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 NEK11Q8NG66 645 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 ALG14Q96F25 216 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 PCMTD1Q96MG8 357 aaPredicted RBP23.4■■□□□ 1.34
CYTH3-208ENST00000482460 PABPC3Q9H361 631 aaKnown RBP23.4■■□□□ 1.34
CYTH3-208ENST00000482460 C6orf106Q9H6K1 298 aaPredicted RBP23.4■■□□□ 1.34
CYTH3-208ENST00000482460 SGK2Q9HBY8 427 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 ANLNQ9NQW6 1124 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 EIF2B4Q9UI10 523 aaKnown RBP23.4■■□□□ 1.34
CYTH3-208ENST00000482460 NCKAP1Q9Y2A7 1128 aa23.4■■□□□ 1.34
CYTH3-208ENST00000482460 UPK3BL1B0FP48 263 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 UPK3BL2E5RIL1 263 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 BCAT2O15382 392 aaPredicted RBP23.39■■□□□ 1.33
CYTH3-208ENST00000482460 SEMA4FO95754 770 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 PMLP29590 882 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 STK19P49842 368 aaPredicted RBP23.39■■□□□ 1.33
CYTH3-208ENST00000482460 VASPP50552 380 aaPredicted RBP23.39■■□□□ 1.33
CYTH3-208ENST00000482460 IRAK1P51617 712 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 CDH4P55283 916 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 UBXN1Q04323 297 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 TYRO3Q06418 890 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 SEMA3BQ13214 749 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 ACBD5Q5T8D3 534 aaPredicted RBP23.39■■□□□ 1.33
CYTH3-208ENST00000482460 ZCCHC9Q8N567 271 aaKnown RBP23.39■■□□□ 1.33
CYTH3-208ENST00000482460 C1orf216Q8TAB5 229 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 PTPRN2Q92932 1015 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 C1orf74Q96LT6 269 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 ERGIC2Q96RQ1 377 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 FAM129BQ96TA1 746 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 FEM1AQ9BSK4 669 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 ZDHHC5Q9C0B5 715 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 HSD3B7Q9H2F3 369 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 DNAAF2Q9NVR5 837 aaKnown RBP23.39■■□□□ 1.33
CYTH3-208ENST00000482460 TMEM63CQ9P1W3 806 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 TBC1D30Q9Y2I9 924 aa23.39■■□□□ 1.33
CYTH3-208ENST00000482460 I6L893 689 aaPredicted RBP23.38■■□□□ 1.33
CYTH3-208ENST00000482460 MMP8P22894 467 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 NUMBP49757 651 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 CST6Q15828 149 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 TRNP1Q6NT89 227 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 TRIM72Q6ZMU5 477 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 APTXQ7Z2E3 356 aaKnown RBP23.38■■□□□ 1.33
CYTH3-208ENST00000482460 BNIPLQ7Z465 357 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 MMAAQ8IVH4 418 aaKnown RBP23.38■■□□□ 1.33
CYTH3-208ENST00000482460 OR52K2Q8NGK3 314 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 OR2I1PQ8NGU4 316 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 GANCQ8TET4 914 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 CFAP57Q96MR6 1250 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 SLC32A1Q9H598 525 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 FBXL12Q9NXK8 326 aa23.38■■□□□ 1.33
CYTH3-208ENST00000482460 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.38■■□□□ 1.33
CYTH3-208ENST00000482460 MID1O15344 667 aa23.37■■□□□ 1.33
CYTH3-208ENST00000482460 GRIK2Q13002 908 aa23.37■■□□□ 1.33
CYTH3-208ENST00000482460 PIP4P1Q86T03 277 aa23.37■■□□□ 1.33
CYTH3-208ENST00000482460 ZNF683Q8IZ20 524 aa23.37■■□□□ 1.33
CYTH3-208ENST00000482460 STK40Q8N2I9 435 aa23.37■■□□□ 1.33
CYTH3-208ENST00000482460 AOPEPQ8N6M6 819 aa23.37■■□□□ 1.33
CYTH3-208ENST00000482460 DEFB124Q8NES8 71 aa23.37■■□□□ 1.33
CYTH3-208ENST00000482460 SNX19Q92543 992 aa23.37■■□□□ 1.33
CYTH3-208ENST00000482460 METTL5Q9NRN9 209 aaKnown RBP23.37■■□□□ 1.33
CYTH3-208ENST00000482460 OR51B4Q9Y5P0 310 aa23.37■■□□□ 1.33
CYTH3-208ENST00000482460 DRGXA6NNA5 263 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 GJB3O75712 270 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 CNTN5O94779 1100 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 ENDOD1O94919 500 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 UNGP13051 313 aaPredicted RBP23.36■■□□□ 1.33
CYTH3-208ENST00000482460 SLC8A1P32418 973 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 RDXP35241 583 aaKnown RBP23.36■■□□□ 1.33
CYTH3-208ENST00000482460 SLC14A1Q13336 389 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 LRRC31Q6UY01 552 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 SLC30A5Q8TAD4 765 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 FRS2Q8WU20 508 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 BIRC7Q96CA5 298 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 HAPLN3Q96S86 360 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 NAT10Q9H0A0 1025 aaKnown RBP23.36■■□□□ 1.33
CYTH3-208ENST00000482460 TMPRSS4Q9NRS4 437 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 SLC25A13Q9UJS0 675 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 VPS28Q9UK41 221 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 SNX10Q9Y5X0 201 aa23.36■■□□□ 1.33
CYTH3-208ENST00000482460 NYNRINQ9P2P1 1898 aaKnown RBP23.36■■□□□ 1.33
CYTH3-208ENST00000482460 DOCK4Q8N1I0 1966 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms